Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00662 ATGGTGGTGAATTTCCAGTACACTGTTCTTGTGTTCTTGGCGATTCTTTTTGTTGGAAAGGCAGAAATTTACATTGTCACCATTGAAGGAGAACCGATTGTAAGTTACAAAGGTGATCTTGATGGGTTTGAAGCTACAGCAATGGAATCTGATGAAAAGATCGACCCTACCAGTGAAATTGTGACATCCTATGCTCGTCACCTCGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGGTCCTTCAAGAAGCTCTATAGTTATAAGCATCTCATCAATGGATTTGCTGTTGACATCACACATGAACAGGCAGAGACTCTAAGACGTACACCAATCGTAAAATCTGTTGAGAGGGATTGGAAGGTTAGAAAACTGACAACGCACACACCAGAGTTTTTGGGCCTTCCAACTGGCGTATGGCCAACCGGTGGTGGCTTTGATAGAGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATTTATCCACATCATCCTAGTTTTGCAACGTACAATACCGAACCTTTTGGGCCGTGCATGAAGTATAAAGGGAAATGCGAAGTTGACCCCAACACTAAGAAGGATTTCTGCAATGGGAAGATCGTTGGAGCCCAACATTTTGCAGAAGCTGCTAAAGCTGCTGGGGCATTTAATCCAGATATTCATTTTGCATCTCCTTTGGATGGTGACGGACATGGAAGCCATACAGCAGCAATTGCAGCTGGAAATAATGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGTAAAGCAAGTGGGATGGCTCCACGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGAATATTTGGAGGATTTGTTGCTGATGTAGTTGCAGCCATTGATCAGGCTGTACATGATGGGGTTGATATTCTCAGTCTTTCAGTGGGCCCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCTTTTGATGCGACCCTTCTTTCAGCTGTGAAGGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGAGGTCCATTTCCTAAAACTTTGGTGTCGTATAGTCCATGGATAGCAACTGTGGCAGCTGCAATTGATGACAGAAGATACAAAAACCATCTGACACTTGGTAATGGAAAGATTTTGGCTGGACTTGGGTTATCACCTTCTACACATTTAAATCGTACATACACATTGGTAGCAGCTAATGATGTTCTGTTAGATTCTTCGGTAACGAAGTACAGCCCTTCAGACTGTCAAAAGCCTGAAGTTCTAAACAAACGCTTGGTTGAAGGAAAAGTACTTCTCTGTGGTTATTCATTCAGTTTTGTTGTTGGTACTGCTTCAATCAAAAAGGTCTCTCAAACAGCAAAAGCCCTTGGGGCAGCTGGCTTTGTTCTTGCTGTTGAAAACATTTCTCCAGGAGCAAAGTTTGACCCTGTTCCTGTCGGCATTCCTGGTATTCTTATAACTGATGTCAGCAAATCAATGGATCTTATAGACTACTACAACACCTCTACACCCCGAGACTGGACGGGTCGGGTCAAGAGTTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGACCAAATATTAGAGATTTTAGCTTTCAGGATGCAGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTAATTTGGGCTGCTTGGTCCCCAAATGGAACGGACGAACCAAACTATGTTGGAGAGGGATTTGCTATGATTTCTGGAACTAGCATGGCAGCGCCACATATAGCTGGCATAGCTGCTCTTGTTAAACAGAAGCATCCAAACTGGAGTCCCGCAGCCATCAAATCGGCTTTAATGACAACATCAACAACAATGGACAGAGGAGGAAGACCTCTTAAAGCACAACAATTTTCCGAAACAGAAGCCATGAAATTGGTAACTGCAACACCTTTCGATTATGGTAGTGGTCATGTAAACCCAAGAGCAGCATTGGATCCGGGACTCATATTTGATGCAGGTTATGAAGATTACTTGGGATTTTTGTGCACAACTGCGGGCATCAACGTTCACGAGATACACAACTATACTAACTCAGCTTGCAACTTCACCATGGGGCATCCCTGGAATCTCAACAGCCCATCAATCACCATCGCCCATCTTGTGGGAACTCAAATCGTTACTCGCAGAGTAACAAATGTTGCCGAAGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTGTTGCCATAGAAGTGAATCCTCCAGCAATGACTTTACTGTCCGGTTCATCAAGAAAATTTTCAGTAACTCTCACAGCCCGATCACTGACAGGAACATATAGTTTTGGCCAGGTTCTACTTAAGGGCAGTAGAGGACACAAGGTTAGAATACCTGTAGTAGCCATGGGATACCAACGATGA 2451 43.53 MVVNFQYTVLVFLAILFVGKAEIYIVTIEGEPIVSYKGDLDGFEATAMESDEKIDPTSEIVTSYARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDITHEQAETLRRTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCMKYKGKCEVDPNTKKDFCNGKIVGAQHFAEAAKAAGAFNPDIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPSTHLNRTYTLVAANDVLLDSSVTKYSPSDCQKPEVLNKRLVEGKVLLCGYSFSFVVGTASIKKVSQTAKALGAAGFVLAVENISPGAKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALVKQKHPNWSPAAIKSALMTTSTTMDRGGRPLKAQQFSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTNSACNFTMGHPWNLNSPSITIAHLVGTQIVTRRVTNVAEEETYTITARMDPAVAIEVNPPAMTLLSGSSRKFSVTLTARSLTGTYSFGQVLLKGSRGHKVRIPVVAMGYQR* 817
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5043791 5051838 - CsaV3_2G008690.1 Csa02g00662 518719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00662 816 Pfam Peptidase inhibitor I9 24 126 IPR010259 -
Csa02g00662 816 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 815 IPR045051 -
Csa02g00662 816 Gene3D - 690 813 - -
Csa02g00662 816 Gene3D Peptidase S8/S53 domain 155 686 IPR036852 GO:0004252|GO:0006508
Csa02g00662 816 SUPERFAMILY Subtilisin-like 128 677 IPR036852 GO:0004252|GO:0006508
Csa02g00662 816 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
Csa02g00662 816 ProSitePatterns Serine proteases, subtilase family, serine active site. 596 606 IPR023828 -
Csa02g00662 816 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Csa02g00662 816 PRINTS Subtilisin serine protease family (S8) signature 232 245 IPR015500 -
Csa02g00662 816 PRINTS Subtilisin serine protease family (S8) signature 595 611 IPR015500 -
Csa02g00662 816 CDD PA_subtilisin_like 375 513 - -
Csa02g00662 816 Pfam PA domain 398 492 IPR003137 -
Csa02g00662 816 ProSiteProfiles Serine proteases, subtilase domain profile. 122 673 - -
Csa02g00662 816 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 128 IPR037045 -
Csa02g00662 816 PANTHER CUCUMISIN-RELATED 14 815 - -
Csa02g00662 816 SUPERFAMILY Protease propeptides/inhibitors 85 126 - -
Csa02g00662 816 CDD Peptidases_S8_3 129 632 IPR034197 -
Csa02g00662 816 Pfam Subtilase family 153 634 IPR000209 GO:0006508|GO:0008236
Csa02g00662 816 Gene3D - 368 533 - -
Csa02g00662 816 Pfam Fibronectin type-III domain 718 810 IPR041469 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa01g02197 Csa02g00662 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g03493 Csa-Chr1:31876017 Csa02g00662 Csa-Chr2:5043791 0 dispersed
Csa02g00662 Csa-Chr2:5043791 Csa06g03883 Csa-Chr6:30695745 0 dispersed
Csa04g00649 Csa-Chr4:4337274 Csa02g00662 Csa-Chr2:5043791 8.53E-06 dispersed
Csa02g00662 Csa-Chr2:5043791 Csa07g02348 Csa-Chr7:21727193 4.66E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00662 - - csv:101219351 1623.99