Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g00690 | ATGGGCCATTCTGCAGCAAAGTTTGGTTTCATTTGCTCAGTCTCAGCACCAGCTTTGGGGTTGCTCACCAAGTTCACTTTCCCCAGTTTCTTCTTGTCCATCTCCCCAAACATCCTTCCAATCACTCTTTCCATTGCACTTGTTTTTGCTTTCATCTTCTTTGCCTTATCCAATTCCTCCAATAATCCTCCAGGTCCTCTCCCTGTTCCCATCTTTGGGAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTGCTCGCTTCATTGTCGCAAAAATACGGCTCTGTCTTCCGACTCAAACTTGGTTACAAGAATCTAGTTGTGGTGTCAGATGCAGAGCTTGCTAACCAAGTCCTCCATGCTCAAGGTGTAGAGTTTGGATCCCGTCCACGAAATGTAGTCTTTGACATTTTCACTGGTAATGGACAAGATATGGTGTTCACCATTTATGGCGACCATTGGCGTAAAATGCGTAGAATTATGACACTGCCGTTTTTTACAAATAAAGTTGTGCATAACTACAGTGGGATGTGGGAGGAAGAAATGGATTTGGTTGTTTGCGATCTTATGAATAACCCAAAGGTGAAATCGGAAGGGTTGGTCATAAGAAAGCGTTTGCAATTGATGTTGTACAACATCATGTATAGAATGATGTTTGATACCAAGTTTGAATCTCAAGATGATCCTTTATTCATTGAGGCAACCCGATTCAACTCTGAAAGAAGTCGATTGGCACAAAGTTTTGAATACAATTATGGAGATTTCATTCCTTTGCTTAGACCCTTTTTGAAGGGTTACTTGAACAAATGCAAGGATTTGCAGGGCAGGAGGTTGGCATTTTTCAACAATAACTATGTTGAGAAAAGAAGAAGGATTATGGCTGCCAATGGAGAAAAGCACAAAATAAGCTGTGCCATGGATCATATTATAGATGCTCAACTAAAAGGAGAAATTAGTGAAGAAAATGTGATATACATTGTGGAAAATATTAATGTTGCAGCAATAGAGACGACACTTTGGTCAATGGAATGGGCAATAGCTGAGTTGGTAAACCATCCAACCGTGCAACAAAAAATTCGAGAGGAAATATCGACTGTGCTAAAAGGAAAGGAAGTAACTGAATCTAACTTACATGAGTTGCCATATCTGCAAGCCACAGTGAAAGAGACATTGAGACTGCACACACCAATACCTTTATTAGTACCACATATGAACTTGGAAGAAGCCAAGCTTGGAGGCTACACAATTCCAAAAGAGTCTAAGGTGGTAGTAAATGCATGGTGGTTGGCCAATAACCCAGCATGGTGGAAAAATCCAGAGGAATTCAGGCCAGAGAGGTTCCTACAAGAAGAAAGTAGCACAGAAGCTGTAGCAGGGGGCAAAGTTGACTTCCGATTTTTACCATTTGGTGTTGGAAGAAGAAGTTGCCCTGGAATAGTTTTGGCACTGCCAATCTTAGGATTGATCATTTCTAAATTGGTAACCAATTTTGAAATGAAGCCTCCGAATGGAATGGAGAAGATTGATGTGAGCGAAAAAGGAGGACAATTCAGTTTGCATATTGCCAACCACTCAACTGTGACATTCAAACCTATGACTGCTTAG | 1608 | 41.17 | MGHSAAKFGFICSVSAPALGLLTKFTFPSFFLSISPNILPITLSIALVFAFIFFALSNSSNNPPGPLPVPIFGNWLQVGNDLNHRLLASLSQKYGSVFRLKLGYKNLVVVSDAELANQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTIYGDHWRKMRRIMTLPFFTNKVVHNYSGMWEEEMDLVVCDLMNNPKVKSEGLVIRKRLQLMLYNIMYRMMFDTKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLKGYLNKCKDLQGRRLAFFNNNYVEKRRRIMAANGEKHKISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPTVQQKIREEISTVLKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPAWWKNPEEFRPERFLQEESSTEAVAGGKVDFRFLPFGVGRRSCPGIVLALPILGLIISKLVTNFEMKPPNGMEKIDVSEKGGQFSLHIANHSTVTFKPMTA* | 536 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5569383 | 5572545 | - | CsaV3_2G009060.1 | Csa02g00690 | 518747 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g00690 | 535 | PANTHER | OS02G0467000 PROTEIN | 7 | 534 | - | - | |
Csa02g00690 | 535 | PRINTS | P450 superfamily signature | 334 | 351 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | PRINTS | P450 superfamily signature | 386 | 397 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | PRINTS | P450 superfamily signature | 468 | 477 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 7 | 534 | - | - | |
Csa02g00690 | 535 | SUPERFAMILY | Cytochrome P450 | 63 | 522 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | PRINTS | E-class P450 group I signature | 115 | 136 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | PRINTS | E-class P450 group I signature | 210 | 228 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | PRINTS | E-class P450 group I signature | 323 | 340 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | PRINTS | E-class P450 group I signature | 343 | 369 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | PRINTS | E-class P450 group I signature | 385 | 403 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | PRINTS | E-class P450 group I signature | 426 | 450 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | PRINTS | E-class P450 group I signature | 467 | 477 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | PRINTS | E-class P450 group I signature | 477 | 500 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 470 | 479 | IPR017972 | GO:0005506|GO:0016705 | |
Csa02g00690 | 535 | Gene3D | Cytochrome P450 | 56 | 529 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g00690 | 535 | Pfam | Cytochrome P450 | 63 | 522 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g00690 | Csa-Chr2:5569383 | Csa06g01117 | Csa-Chr6:9273652 | 0 | dispersed | |
Csa02g00690 | Csa-Chr2:5569383 | Csa02g00691 | Csa-Chr2:5572966 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g00690 | K00487 | - | csv:101205775 | 1046.96 |