Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00690 ATGGGCCATTCTGCAGCAAAGTTTGGTTTCATTTGCTCAGTCTCAGCACCAGCTTTGGGGTTGCTCACCAAGTTCACTTTCCCCAGTTTCTTCTTGTCCATCTCCCCAAACATCCTTCCAATCACTCTTTCCATTGCACTTGTTTTTGCTTTCATCTTCTTTGCCTTATCCAATTCCTCCAATAATCCTCCAGGTCCTCTCCCTGTTCCCATCTTTGGGAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTGCTCGCTTCATTGTCGCAAAAATACGGCTCTGTCTTCCGACTCAAACTTGGTTACAAGAATCTAGTTGTGGTGTCAGATGCAGAGCTTGCTAACCAAGTCCTCCATGCTCAAGGTGTAGAGTTTGGATCCCGTCCACGAAATGTAGTCTTTGACATTTTCACTGGTAATGGACAAGATATGGTGTTCACCATTTATGGCGACCATTGGCGTAAAATGCGTAGAATTATGACACTGCCGTTTTTTACAAATAAAGTTGTGCATAACTACAGTGGGATGTGGGAGGAAGAAATGGATTTGGTTGTTTGCGATCTTATGAATAACCCAAAGGTGAAATCGGAAGGGTTGGTCATAAGAAAGCGTTTGCAATTGATGTTGTACAACATCATGTATAGAATGATGTTTGATACCAAGTTTGAATCTCAAGATGATCCTTTATTCATTGAGGCAACCCGATTCAACTCTGAAAGAAGTCGATTGGCACAAAGTTTTGAATACAATTATGGAGATTTCATTCCTTTGCTTAGACCCTTTTTGAAGGGTTACTTGAACAAATGCAAGGATTTGCAGGGCAGGAGGTTGGCATTTTTCAACAATAACTATGTTGAGAAAAGAAGAAGGATTATGGCTGCCAATGGAGAAAAGCACAAAATAAGCTGTGCCATGGATCATATTATAGATGCTCAACTAAAAGGAGAAATTAGTGAAGAAAATGTGATATACATTGTGGAAAATATTAATGTTGCAGCAATAGAGACGACACTTTGGTCAATGGAATGGGCAATAGCTGAGTTGGTAAACCATCCAACCGTGCAACAAAAAATTCGAGAGGAAATATCGACTGTGCTAAAAGGAAAGGAAGTAACTGAATCTAACTTACATGAGTTGCCATATCTGCAAGCCACAGTGAAAGAGACATTGAGACTGCACACACCAATACCTTTATTAGTACCACATATGAACTTGGAAGAAGCCAAGCTTGGAGGCTACACAATTCCAAAAGAGTCTAAGGTGGTAGTAAATGCATGGTGGTTGGCCAATAACCCAGCATGGTGGAAAAATCCAGAGGAATTCAGGCCAGAGAGGTTCCTACAAGAAGAAAGTAGCACAGAAGCTGTAGCAGGGGGCAAAGTTGACTTCCGATTTTTACCATTTGGTGTTGGAAGAAGAAGTTGCCCTGGAATAGTTTTGGCACTGCCAATCTTAGGATTGATCATTTCTAAATTGGTAACCAATTTTGAAATGAAGCCTCCGAATGGAATGGAGAAGATTGATGTGAGCGAAAAAGGAGGACAATTCAGTTTGCATATTGCCAACCACTCAACTGTGACATTCAAACCTATGACTGCTTAG 1608 41.17 MGHSAAKFGFICSVSAPALGLLTKFTFPSFFLSISPNILPITLSIALVFAFIFFALSNSSNNPPGPLPVPIFGNWLQVGNDLNHRLLASLSQKYGSVFRLKLGYKNLVVVSDAELANQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTIYGDHWRKMRRIMTLPFFTNKVVHNYSGMWEEEMDLVVCDLMNNPKVKSEGLVIRKRLQLMLYNIMYRMMFDTKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLKGYLNKCKDLQGRRLAFFNNNYVEKRRRIMAANGEKHKISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPTVQQKIREEISTVLKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPAWWKNPEEFRPERFLQEESSTEAVAGGKVDFRFLPFGVGRRSCPGIVLALPILGLIISKLVTNFEMKPPNGMEKIDVSEKGGQFSLHIANHSTVTFKPMTA* 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5569383 5572545 - CsaV3_2G009060.1 Csa02g00690 518747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00690 535 PANTHER OS02G0467000 PROTEIN 7 534 - -
Csa02g00690 535 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 7 534 - -
Csa02g00690 535 SUPERFAMILY Cytochrome P450 63 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Csa02g00690 535 Gene3D Cytochrome P450 56 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00690 535 Pfam Cytochrome P450 63 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00690 Csa-Chr2:5569383 Csa06g01117 Csa-Chr6:9273652 0 dispersed
Csa02g00690 Csa-Chr2:5569383 Csa02g00691 Csa-Chr2:5572966 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00690 K00487 - csv:101205775 1046.96