Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00691 ATGGCTTCCAATGCCTTACTTTCTCTATTTTCAATGATTCTTGTTTCTGTTGTTACTAAATTGATATTTCCCACGTCTCCACTTGCTTTTGGACTAACTATCTTCCTTGTTCCTCTCCTCACCTATATCATCTCTTCCATGGCCTCCTCCTCTAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATTTTTGGCAATTGGCTCCAAGTCGGTAATGATCTCAACCATCGTTTACTTGCTTCCTTGTGCAACAGATTTGGCTCCATATTTCTCTTGAAGCTTGGCTCCAAGAACCTTGTAGTTGTGTCTGATGCCGAGCTTGCCAGCCAAGTTCTCCATGCTCAGGGTGTCGAGTTTGGCTCTCGTCCTCGTAATGTTGTGTTTGATATCTTCACTGGAAATGGTCAGGATATGGTGTTTACGGTTTATGGAGACCACTGGCGTAAGATGCGAAGAATCATGACGTTGCCATTTTTTACAAATAAAGTGGTGCATAATTATAGTGGTATGTGGGAGGATGAGATGGACTTTGTGGTACGTGACCTTAAGAGTAACAAGAAGTTTCAATCTGAAGGGATAGTCATCAGAAAGCGTTTGCAGTTGATGTTGTACAACATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCTCAGGATGATCCTTTGTTCATCGAAGCAACTCGATTCAACTCAGAAAGGAGTCGATTGGCACAAAGCTTTGAGTACAACTATGGAGATTTTATTCCTCTACTCAGACCCTTCTTGAGAGGCTACTTGAACAAGTGTAGGGATTTGCAGAGTAGGCGGTTGGAATTTTTCAACAAAAACTATGTTGAGAAAAGAAGAAAGATAATGGCTGCTAATGGAGATAAACACAAGATAACTTGTGCCATGGATCATATCATAGATGCTCAAATGAAAGGTGAGATAAGTGAAGAGAATGTGATTTACATCGTAGAGAACATCAATGTGGCAGCGATAGAAACAACATTATGGTCAATGGAATGGGCAATAGCCGAGCTAGTGAATCATCCAGAAATCCAACACAAGATTCGAGAGGAGATTGCCAACGTCCTAAAAGGAAAGGAAGTGACTGAATCAAACCTTCACGAATTGCCATACTTACAAGCAACAGTAAAAGAAACATTGAGGTTGCACACCCCAATTCCATTGTTAGTGCCACATATGAACTTGGAAGAGGCGAAACTAGGAGGATACACCATTCCAAAGGAATCCAAGGTGGTCGTTAATGCATGGTGGCTAGCTAATAACCCCAAGTGGTGGAAAAATCCAGAGGAGTTTAGGCCAGAGAGGTTCTTCGAAGAAGAAAGTGGAACAGAAGCGGTTGCTGCAGGAAAAGTGGATTATCGATTCTTACCCTTTGGAGTTGGAAGGAGGAGTTGTCCTGGAATTGTTCTGGCAATGCCAATATTAGGTCTCATTGTTGCCAAGTTAGTTTCAAAGTTTGAAATGAAACCCCCAAGTGCAATGGAGAAGATCGATGTCACAGAGAAAGGAGGACAATTCAGCCTACATATAGCCAACCACTCCACTGTCGTTTTTAACCCCATCAATTCTTAA 1581 42.0 MASNALLSLFSMILVSVVTKLIFPTSPLAFGLTIFLVPLLTYIISSMASSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASLCNRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSGMWEDEMDFVVRDLKSNKKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRDLQSRRLEFFNKNYVEKRRKIMAANGDKHKITCAMDHIIDAQMKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEIQHKIREEIANVLKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPKWWKNPEEFRPERFFEEESGTEAVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPPSAMEKIDVTEKGGQFSLHIANHSTVVFNPINS* 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5572966 5582676 - CsaV3_2G009070.1 Csa02g00691 518748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00691 526 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 5 525 - -
Csa02g00691 526 Gene3D Cytochrome P450 47 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 SUPERFAMILY Cytochrome P450 54 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 Pfam Cytochrome P450 54 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00691 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Csa02g00691 526 PANTHER OS02G0467000 PROTEIN 5 525 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00691 Csa-Chr2:5572966 Csa06g01117 Csa-Chr6:9273652 0 dispersed
Csa02g00690 Csa-Chr2:5569383 Csa02g00691 Csa-Chr2:5572966 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00691 K00487 - csv:101205537 1044.26