Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00855 ATGGAGCATGGAGGTGTTGTGTCGAAGGGGATGGCGTCAGACCCTTCAAGTTCGTACCAAAAAATAATAATAGTTGCAGCTATTGCAGCCGGAGTCCAATTTGGTTGGGCTCTACAGCTTTCATTGCTAACACCTTACGTCCAACAACTTGGAGTTTCACATACATGGTCCGCTTTCATATGGCTTTGCGGACCATTATCAGGACTTATTGTGCAACCCACTGTCGGGTACTACAGTGATCGCTGCACCTCTAGGTTTGGTCGTCGTCGGCCGTTCATTGTTGCTGGATCTACTTTTGTGGCAACTGCAGTTTTCCTCATTGGCTTTGCTGCAGACATTGGGCATGCAGTGGGTGATCCGCTTAACAAACCCACAAAACCAAGAGCTGTTGCCATCTTTGTGGTTGGATTTTGGGTTCTTGATGTTGCTAACAACATGCTCCAAGGCCCTTGTAGAGCTCTGTTGGCAGATATGTCATGTAACAACCACAAGAAGATGAGAATGGCCAATGGATTTTTCTCATTCTTCATGGGGGTAGGGAATGTTTTGGGGTACGCAGCTGGGTCCTATAACAAACTCTACAAATTCCTTCCCTTCACACTAACCAAAGCATGTGACAGTTACTGTGCCAACCTCAAAACATGCTTCTTGATCGACATTGTATTCCTTCTCCTCGTTACCACGTTCGCTGTGTTGATGGTGAGCGAGAACCAATTTGACCCATTGGAGATTGACGAAGAAGCAACACCCTTTTTCGGGAAATTGTTTGGAGCACTCAAGAAGTTGGAGAAGGCCAATGTGGCTTTTGTTGCTGGTAACAGCCTTGAACTGGATCGGTTGGTTCCCATTTATCATGTACGATACTGA 867 46.14 MEHGGVVSKGMASDPSSSYQKIIIVAAIAAGVQFGWALQLSLLTPYVQQLGVSHTWSAFIWLCGPLSGLIVQPTVGYYSDRCTSRFGRRRPFIVAGSTFVATAVFLIGFAADIGHAVGDPLNKPTKPRAVAIFVVGFWVLDVANNMLQGPCRALLADMSCNNHKKMRMANGFFSFFMGVGNVLGYAAGSYNKLYKFLPFTLTKACDSYCANLKTCFLIDIVFLLLVTTFAVLMVSENQFDPLEIDEEATPFFGKLFGALKKLEKANVAFVAGNSLELDRLVPIYHVRY* 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7878090 7878956 + CsaV3_2G010710.1 Csa02g00855 518912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00855 288 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 18 265 - -
Csa02g00855 288 PANTHER SUGAR TRANSPORTER 18 265 - -
Csa02g00855 288 SUPERFAMILY MFS general substrate transporter 22 250 IPR036259 -
Csa02g00855 288 Pfam MFS/sugar transport protein 28 186 - -
Csa02g00855 288 Gene3D MFS general substrate transporter like domains 16 272 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00855 Csa-Chr2:7878090 Csa02g02236 Csa-Chr2:20093960 1.29E-93 dispersed
Csa02g00853 Csa-Chr2:7858083 Csa02g00855 Csa-Chr2:7878090 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00855 K15378 - csv:116401998 521.546