Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00856 ATGGGTTTGGAAGTGTACGGAGGAAAGCCAAAGGGGAGTCCTGAAGAAGTCAAGTTCTATGACCTTGGTGTTCGTGCTGGGGCCCTTGGGTTGATGGTAAACTCATTTGTTTTGGGATTTTCAGCTTTGGGAATTGAGCCAATAAGTCGTATTTTAGGAGGCCTCAGATGGTGGTGGGGAATTGTTAACATTATATTTACAGTTTGCATGGGATCCACCGTCGTGGTTACAAAGGTTGCTGAGCGTTGGAGGTCCGTTAATGGTTTGCGTCCTCCTCCACTAAACGTCAGGGCAGGAGCATTTTCGATCTTTGCGATATTGGGTATTCCATTGTCAGTCACTTTTAGTGTTCCATTTGCGCTTGCGTCCATCTTTTCTTCAGAATCGGATGCGGGTCAAGCTAACAAAGCATATGCTTCTTTCCTTTCTCTCCCCGTTCACATCACAACAGGCCTCTCCTTGGGAATTCTCAACCTCTTCATTGTCATTCCACAGTTCATCGTATCCGCAGTTAGTGGGCCATTAGATGCTGCTTTCGGAGGAGGAAACTTACCCGCATTCGTAATGGGTGGAATTGCTTCTTTTGCAAGTGCAATGTGTGCAATGTTCGTCCTCCCCGATCCACCACCTCAATCCGATGTCTCCTTAACAATGGGCGGTGGTCATTGA 669 47.09 MGLEVYGGKPKGSPEEVKFYDLGVRAGALGLMVNSFVLGFSALGIEPISRILGGLRWWWGIVNIIFTVCMGSTVVVTKVAERWRSVNGLRPPPLNVRAGAFSIFAILGIPLSVTFSVPFALASIFSSESDAGQANKAYASFLSLPVHITTGLSLGILNLFIVIPQFIVSAVSGPLDAAFGGGNLPAFVMGGIASFASAMCAMFVLPDPPPQSDVSLTMGGGH* 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7878961 7879696 + CsaV3_2G010720.1 Csa02g00856 518913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00856 222 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 1 215 - -
Csa02g00856 222 PANTHER SUGAR TRANSPORTER 1 215 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00856 Csa-Chr2:7878961 Csa05g01698 Csa-Chr5:20184545 2.02E-40 dispersed
Csa02g00853 Csa-Chr2:7858083 Csa02g00856 Csa-Chr2:7878961 2.13E-123 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00856 K15378 - csv:116402007 399.438