Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00863 ATGGGAATTAGTTTATTGGAGTGGTGTAATAATAATAATAGAGCTGATTCAGAAGAAGAATGGTACATGAGATCAAGTAATTTAAGAAGAAGTGGAGTAGTAGCGTTGGTGTTGGTGATGATAGCAATAATAAGTGCATGTTGGATAATTATTGTTCATAGATGGAACCAAAGGAAGAAGATGAGGAGAGGTCCAAAAACATGGCCAATCGTAGGAGCAGCAATAGAACAGTTTGTAAATTACCACAGAATGCATGATTGGATTTTGGGTTACCTTAATCTCTACAGAACTGTTGTGGTTCCCATGCCTTTCACTACTTACACTTATATTGCTGACCCTGCCAATGTTCAACATATTCTCAAGACCAACTTTGCTAATTATCCAAAGGGTGATGTATATCATTCATACATGGAAGTGCTTCTTGGAGATGGGATCTTCAACGTAGATGGAGAGTTGTGGAGGAAACAAAGGAAAACTGCTAGCTTCGAATTTGCATCTAAGAATTTGAGGGATTTCAGTACCTTAGTTTTTAGAGACTATGGTCTCAAGCTATCAACTATTTTAACACGTGCCTCTTTACTCAACCAACAAATTGACATGCAGGAATTGTTGATGAGGATGACTTTAGATTCCATATGCAAGGTTGGCTTTGGTGTTGAAATTGGATCATTGGCTCCCAATTTGCCAGAAAATAAGTTTGCTAAGGCCTTTGATACAGCCAATATGATCGTTACCCTTCGCTTCATTGATCCTCTGTGGAAAATTAAAAGATTTCTGAATCTGGGATCTGAAGCTCTTCTTGATAAATCCATCAAAACCATTGATGATTTCACTTATTCTGTCATTGCCACAAGGAAAAAAGAGATCCAAGAAGCTCAAACTACACACACAGATCCCAATAAGATGAAACATGACATATTGTCGAGATTTATTGAGTTAGGGGAAGACCCAAACAACAAATTCACAGACAAAAGCTTAAGAGATATTGTTCTGAACTTCGTGATTGCCGGACGTGACACAACAGCCGCAACTCTTTCATGGAGTATTTATATGCTAATGACTCATTCAGATGTCTCCCAAAAACTTTACTCAGAGCTCAAAAGTTTTGAAGAAGAAAGAGCCAAAGAACACTCCATTTCATTGCTTCAATATCAACCAAATGATATTCAATCCTTTGACACAAGAGTTGTACAATTTTCACAACTTCTTAATTATGATTCTCTTGCTCGATTACATTACTTGCATGCTATCGTTACTGAGACACTTCGTCTTTACCCTGCAGTTCCCCAGGACCCAAAGGGAATTTTGGAGGATGATGTATTGCCAGATGGGACAAAGGTAAGAGCTGGAGGAATGGTGACATATGTTCCTTACTCGATGGGAAGAATGGAATACAATTGGGGTTATGATGCAACTTCTTTTAAACCTGAAAGATGGCTCAAACAAGGCATTTTCCAGAATGAATCTCCATTCAAGTTCACAGCTTTTCAGGCTGGACCAAGGATCTGCATGGGGAAAGACTCGGCATATCTACAAATGAAAATGACTCTTGCCATTTTATGCAGATTCTACAAATTTAGTTTGGTGAGTGGGCATAGAGTCGACTACAGAATGATGACTATTCTCTCAATGGCTAATGGCTTGAAAGTTACTGTGGCTCCACGCTCTTAA 1671 38.6 MGISLLEWCNNNNRADSEEEWYMRSSNLRRSGVVALVLVMIAIISACWIIIVHRWNQRKKMRRGPKTWPIVGAAIEQFVNYHRMHDWILGYLNLYRTVVVPMPFTTYTYIADPANVQHILKTNFANYPKGDVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTLVFRDYGLKLSTILTRASLLNQQIDMQELLMRMTLDSICKVGFGVEIGSLAPNLPENKFAKAFDTANMIVTLRFIDPLWKIKRFLNLGSEALLDKSIKTIDDFTYSVIATRKKEIQEAQTTHTDPNKMKHDILSRFIELGEDPNNKFTDKSLRDIVLNFVIAGRDTTAATLSWSIYMLMTHSDVSQKLYSELKSFEEERAKEHSISLLQYQPNDIQSFDTRVVQFSQLLNYDSLARLHYLHAIVTETLRLYPAVPQDPKGILEDDVLPDGTKVRAGGMVTYVPYSMGRMEYNWGYDATSFKPERWLKQGIFQNESPFKFTAFQAGPRICMGKDSAYLQMKMTLAILCRFYKFSLVSGHRVDYRMMTILSMANGLKVTVAPRS* 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7968319 7971807 - CsaV3_2G010790.1 Csa02g00863 518920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00863 556 PANTHER CYTOCHROME P450 37 553 - -
Csa02g00863 556 PANTHER CYTOCHROME P450 704B1 37 553 - -
Csa02g00863 556 SUPERFAMILY Cytochrome P450 64 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00863 556 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00863 556 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00863 556 PRINTS E-class P450 group I signature 415 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00863 556 PRINTS E-class P450 group I signature 493 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00863 556 PRINTS E-class P450 group I signature 503 526 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00863 556 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00863 556 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00863 556 PRINTS P450 superfamily signature 494 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00863 556 PRINTS P450 superfamily signature 503 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00863 556 Pfam Cytochrome P450 64 547 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g00863 556 Gene3D Cytochrome P450 49 556 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00863 Csa-Chr2:7968319 Csa03g00951 Csa-Chr3:7764432 1.62E-130 dispersed
Csa02g00863 Csa-Chr2:7968319 Csa07g01975 Csa-Chr7:19392733 1.63E-123 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00863 K20495 - csv:101222076 1112.44