Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00931 ATGGGTGGTGATGGAAAGCTCTTTACATTCGCTGAAGTCTCTCAGCACAACAATCCCAAGGACTGTTGGTTGATCATCAATGGCAAGGTTTACAATGTAACCGAGTTCTTGGAAGATCATCCCGGTGGTGACGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACTGATGATTTTGAAGACGTGGGTCATAGTGAGAGCGCAAGAGAAACGATGAGCAAATACTACGTTGGAGAGATCGACATCTCGACACTCCCAGAACGGTTGACATACACAGGTCCAAAGCAGCCTCATTACAATCAGGATAAGACAACCGAGTTCATTATTAAGCTCCTCCAGTTCTTGGTTCCTCTCGCAATCTTGGGATTGGCGGTTGGTATCCGCTTTTACAACAAATCAAGCTGA 405 46.17 MGGDGKLFTFAEVSQHNNPKDCWLIINGKVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARETMSKYYVGEIDISTLPERLTYTGPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRFYNKSS* 135
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8786198 8789620 - CsaV3_2G011470.1 Csa02g00931 518988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00931 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Csa02g00931 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Csa02g00931 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Csa02g00931 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Csa02g00931 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Csa02g00931 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Csa02g00931 134 SMART Cyt_b5_2 8 81 IPR001199 -
Csa02g00931 134 Gene3D - 3 85 IPR036400 -
Csa02g00931 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Csa02g00931 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Csa02g00931 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 89 IPR036400 -
Csa02g00931 134 PANTHER CYTOCHROME B5 1 132 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00931 Csa-Chr2:8786198 Csa03g02688 Csa-Chr3:25692835 3.40E-63 dispersed
Csa06g00093 Csa-Chr6:619820 Csa02g00931 Csa-Chr2:8786198 1.24E-11 dispersed
Csa02g00931 Csa-Chr2:8786198 Csa03g01102 Csa-Chr3:8715763 4.52E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00931 K23490 - csv:101213506 278.1