Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01033 ATGGCCGGTGAGGTAGCGGTGGAGGGTGCTGTGGCGGCGGCGGCGTTGGCGACAGAAGTAGCCGATTCCAATCCCCAGGCCCATAAATTGGAGAGAAAATGGACCTTTTGGTTTGATAATCAGTCCAGGCCGAAGCAAGGTGCTGCTTGGGGCACCTCTCTTCGCAAGGTCTATACCTTCGACACCGTCGAAGAATTTTGGTGTTTGTACGATCAGTTATTCAAGCCAAGCAAGTTACCGGCGAATGCAGATTTTCACCTGTTCAAAACTGGAGTTGAACCGAAATGGGAAGATCCCGAGTGCGCTAATGGAGGAAAATGGACTGTCACCAGCAGTCGAAAGGCTAACCTTGATAATATGTGGCTGGAAACGTTGATGGCCTTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGCCAGAGGCAGGACAAACTTGCTCTGTGGACCAAGACAGCAACAAACGAGGCTGCTCAGATGAGCATTGGTAGGAAATGGAAGGAGATTATCGATGTGACCGACAAGATTTCCTTCAGCTTTCATGAGGATTTGAGAAGGGAAAAGTCGGCAAAAGCTCGATATAGTGTTTGA 612 49.51 MAGEVAVEGAVAAAALATEVADSNPQAHKLERKWTFWFDNQSRPKQGAAWGTSLRKVYTFDTVEEFWCLYDQLFKPSKLPANADFHLFKTGVEPKWEDPECANGGKWTVTSSRKANLDNMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKISFSFHEDLRREKSAKARYSV* 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10011592 10013965 + CsaV3_2G012490.1 Csa02g01033 519090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01033 203 Pfam Eukaryotic initiation factor 4E 29 185 IPR001040 GO:0003723|GO:0003743|GO:0006413
Csa02g01033 203 PANTHER BNAA08G29940D PROTEIN 1 195 - -
Csa02g01033 203 SUPERFAMILY eIF4e-like 23 196 IPR023398 -
Csa02g01033 203 Gene3D RNA Cap, Translation Initiation Factor Eif4e 19 203 IPR023398 -
Csa02g01033 203 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 195 IPR001040 GO:0003723|GO:0003743|GO:0006413
Csa02g01033 203 ProSitePatterns Eukaryotic initiation factor 4E signature. 84 107 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02275 Csa-Chr1:19900405 Csa02g01033 Csa-Chr2:10011592 2.24E-71 dispersed
Csa02g01033 Csa-Chr2:10011592 Csa03g04014 Csa-Chr3:35065910 2.57E-30 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01033 K03259 - csv:101208495 398.282