Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01103 ATGGCTCGGGACGGGCATGTAGTGCCGGTTGATCCACAGACGGCGCTTACTGTGAAGAAGAAGAAACAATCTTCTCGGAATTGGATTTTACTGGATTGTACGGGCCAAGGGACCGTCCTTGATGTCGATAAGCATGCTATTATGCATCGAGTTCAAATTCATGCTCGTGACCTTCGGATTCTTGATCCTTTGCTTTCTTATCCCTCCACCATTTTGGGGCGTGAGAGGGCCATTGTTCTTAATCTCGAGCACATAAAGGCGATCATTACTGCTGATGAGGTTTTGCTTAGAGATCCGACAGATGAACATGTCATCCCTGTGGTTGAGGAGCTTCAGAGGCGACTGCCTCCTTCTAATACCTTCCAGTTTCAAGTTCAAGGAGATGGTAAAGAGTATCAGAGTGGCCCACAAGATGGTGAAGCTGAAGAAGATGACTCGCCATTTGAATTTCGTGCCCTTGAAGTAGCGTTGGAAGCTATATGTAGTTTTCTTGCTGCACGGACAACTGAACTGGAGACTGCTGCTTATCCTGCCTTGGATGAGCTTACTGCCAAGATTAGTAGCCGCAACTTGGACAGAGTTCGTAAATTGAAGAGTGCGATGACCAGGTTGACTGCAAGGGTTCAAAAGGTAAGAGATGAGCTTGAACAATTACTGGACGACGATGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGAGCTCATCTTCTCCTGTAAGTGGTTCTGGTCCTGCCAATTGGTTTCCTGCCTCTCCTACCATTGGTTCAAAGATCTCAAGAGCAAGCAGAGCAAGTGTTGCAACTGTACGTGGGGACGAGGACGACATCGAGGAACTTGAAATGCTGCTGGAGGCTTACTTTATGCAAATTGATGGTACATTGAACAAATTAACTACACTGCGAGAATATATTGATGACACAGAAGATTATATTAACATCCAGCTTGACAATCACCGTAATCAACTCATTCAGTTGGAGCTCTTTTTAAGTTCTGGTACTGTTTGTTTGTCTATCTATTCTTTGGTGACTGCAATATTCGGCATGAACATTCCTTACACTTGGAATGACGGTCACGGATTCATTTTTAAATGGGTTGTCATTATATCTGGATTCGCTTGCGCCGTGTTGTTCATCACAATTATTTACTATGCTCGCTACAAAGGTTTGGTGGGATCTTGA 1182 44.33 MARDGHVVPVDPQTALTVKKKKQSSRNWILLDCTGQGTVLDVDKHAIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITADEVLLRDPTDEHVIPVVEELQRRLPPSNTFQFQVQGDGKEYQSGPQDGEAEEDDSPFEFRALEVALEAICSFLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKMSSSSPVSGSGPANWFPASPTIGSKISRASRASVATVRGDEDDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVTAIFGMNIPYTWNDGHGFIFKWVVIISGFACAVLFITIIYYARYKGLVGS* 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10764690 10770100 - CsaV3_2G013190.1 Csa02g01103 519160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01103 393 CDD Mrs2_Mfm1p-like 28 390 IPR039204 -
Csa02g01103 393 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 329 381 IPR045863 -
Csa02g01103 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 393 IPR039204 -
Csa02g01103 393 Pfam CorA-like Mg2+ transporter protein 270 379 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Csa02g01103 393 MobiDBLite consensus disorder prediction 119 145 - -
Csa02g01103 393 Gene3D Magnesium transport protein CorA, transmembrane region 105 323 - -
Csa02g01103 393 Gene3D - 14 99 - -
Csa02g01103 393 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 393 - -
Csa02g01103 393 Coils Coil 194 221 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01103 Csa-Chr2:10764690 Csa02g01155 Csa-Chr2:11253390 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01103 K16075 - csv:101203841 729.939