Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01213 ATGGATAACTCTCTTACAGCCATGCCCGAGTCAAACGAGCAAGAAGGAGCTCAATCCTTTAATCAAACCTCTCCAGCAAGAAGAGCTGGCCTCTTCTATAAGCTGGTAGTGCCATCCATTCTTCAAGACAAGAAGCTGAAAATACCAAACAAGTTTGCTAAGAAGTTTGGAGGTGATATTTTGGATCTTGTTACTCTGGTTGCTCCTAATGGTTATCGATGGGTTCTGGAATTAAAAAGACATGGCCGTAGTATGTGGTTTGAGGATGGTTGGCATGAATTTGTCAAACACCATTGCATTCAAGTTGGACAGCTCTTGGTCTTCAGATTTGAAGGAAATTCCGTTTTCAACTTTTACATGTTCAACCTAACTGCAATTCCAAATGGTCCATGCAATACTTCAAATGCTTCCATTGAACAAAACGATGGCGAACAATGCCCAGATACACTTGGAAAAGAAGCTGAATACAAGAAATTAGTTGAAATATTAGGAACTGGTTCTCCTGACCCCTCTCCACGTCCTTCTGTCAAGGACCTTGTTTGTGAGTTTCCAGATCAGCAAAAATTCAATGGAAGTTGCAATGGGACTAGCATTAAGAATTTTATGCATTGGTTCGACACAGAGAACCTGCATCCTCTAAAGGATTTTGATAATCCACTAAAGCATTTAGATAAGTTGCGCATGCAACTACTAAATTCAAATCGAGATATCGGTATACAGTTCGACGGGGATGAGCTTGCGAAAGCTAGAGAAAATCATGACTTTCAATTGAATCAATCCTCTGATGAAAGAGAGGAAGGAGCCATGAAAAAGAAGTTAAAACTTGAACCAATTGACTACTACAATGACAATGAGCCAATAGACGAAAAAAAATGTGGAAACGTCCCACATAAAATTAATAGGATGGCTTTTGGAGTTGAGGAGTTCAAGTTTGGTAATCCGTTTTGCTGGATTGTTATGAGACAATCCTATATACGAAGAGGGTTCCATTTGCATATACCATCCAAATTTGCGGAGAAGTATCTAAAAGGGGTCTGGGGCGATATCACACTTCAGGTTTCAAGTGGGAAGCAATGGCGTGTTCGATGCATTCGTGAAGGTCCTGGCACCAAGTTAACCAGGGGATGGGCTGACTTTGTCGTGGACAACGATTTGAAAGAAGAAGACGTTTGTGTCTTTGAGCTGATTAATATGAAAGATATTGTGATGCAAGTTACAGTATTCCGTGTCCATGGAAATTGGAAAAACCCCAACTGGAACATCCAGTTTATTGTTATGCAATTATGTTGGAATTTTTCTCCAAAGACAGATGACAATGAGGTCTTGGTTTACACAACACCTTGTTGTTGCAGTTTATCCTTTTTGGACTTGGCAGGCGCCAGTAGTCAGAGTAGTTTCCCATCAAATTATGACTATTCGGTTAATGAAATTCCATGGAGAAGGATGATGCAGGGACTTCACCACCAACAGCAGCAACTAGCGGCCCTTCTCAACGTAGCTTTGCGGAAGGATGATCCTAATCCCACTACCTCAAGTTCCAGTACCGCCGGTGCCACTTCCGACGAGGACGACTCTGCTAGAATTGCAGCTATCAATTCAATCCATCGTGCCATTGTTTATCCTCCTAATTCGCTTCTTGTAACTCACTCCGCCACTTTCCTCTCCCAGGGCTTCTCTCAGCTTCTATCTGATAAGTCATACCCAGTGAGACAGGCGGCAGCCATTGCTTATGGAGCTCTCTGTGCTGTCTCATGTTCAATCACTGCATCACCAAATGGAAGGCAAAATAGTGTACTACTTGGAACTTTGGTTGATCGATTCATTGGTTGGGCATTGCCATTGCTTAGCCATGTCACTGCAGGTGATGCAACCACCAAGTTGGCATTGGAGGGATTGCAAGAGTTCATTAACATTGGAGAAGCTGGTGCTGTGGAGAGATTTGCTTTGCCAATCCTTAAAGCATGCCAAGTACTTCTTGAGGATGAGAGAACTCCCTTGTCTTTATTACATGGACTATTAGGAGTTTTAACTTTGATTTCTTTGAAGTTTTCTAGATCCTTCCAACCTCATTTCCTTGATATTGTTGATCTGCTTCTAGGTTGGGCATTAGTTCCAGATCTAACCGATTCAGATAGGCACATCATTATGGACAGTTTCTTACAGTTTCAGAAGCACTGGGTGGGTAATTTGCAGTTTTCTCTGGGGTTATTGTCAAAGTTCTTGGGTGACATGGATGTATTACTTCAAGATGGGAGTCCTGGGACGCCTCAACAATTCCGCAGGTTACTTGCATTACTTTCTTGTTTTTCAACAATTCTTCGGTCTGCTGCTTCCGGGTTGTTGGAATTGAACCTTCTTGAGCAAATAAGTGAACCACTTTCGAGAATGCTTCCTCAGTTGTTGGGATGCTTATCTATGGTTGGACGTAAATTTGGATGGTTGGAGTGGATTGATAATTTGTGGAAATGCTTGACTCTTTTGGCAGAAATATTACGTGAGCGTTTTTCCACCTATTATCCACTTGCTATTGATATCCTATTCCAAAGTTTGGAAATGACCAGAGCTAACCGTGTAGTGAAAGGTCAGAAGATTACGTTTCTTCAAGTTCATGGTGTTTTGAAAACTAATCTTCAATTATTGTCCCTTCAAAAATTTGGGCTGCTGCCATCATCTGTGCACAGAATACTGCAATTTGATGCACCAATATCTCAGCTTAGAATGCATCCAAATCATTTGGTAACAGGTAGTTCTGCTGCCACTTATATATTCTTGCTCCAACATGGGAATAATGAAGTTGTTGAACAAACGGTGGCATTATTAATTGAAGAGCTAGGTATGTTCAGTGGCTTGTTAGAAAAAGGTTTAGATCAAAGAGGTATCAATGGTATTCTTGATTCTCAATTTTGTTCAACTATGGATTTGTTCGCCCTAATTAAGTTTGATTTGAGAGCCTTATTGACATGTACTATCTCTAGTGGAACTATTGGTCTGATAGGCCAAGAAAACGTTGCTTTCACATGTCTAAAAAGGTCAGAAAGATTGATTTCCTTCATTATGGAAAAACTGAATCCTTTTGACTTTCCACTTCAGGCTTATGTGGAATTGCAAGCTGCTATCCTCGATACATTGGACAGGTTGACCACAACTGAATTCTTTTGCAAGTGCTCTTTGAAGAAATTGAGCAGCGAGAACCGTTTTCTGGATTCAGGAGAAAACATAGATTCTTATCAAAAAAAAGGAGAAAACATAGATGAAGCCCATCTAAAGAAGGATCATTCAGCTATTATTATTGAGCAACTAACAAAATACAATGCTCTCTTCTCCAAAGCCCTTCATAAAGCATCTCCACTAACAGTTAAAATAACAACCCTGGGTTGGATTCAGAGATTCTGTGAGAATGTCGTTACTATTTTTAAGAATGACAAGACATATGCCAACTTTTTTGAAGAATTTGGATATTTTAGCGTCATAGGAAACTTGATTTTTATGGTAATTGATGCCGCATCTGACAGGGAGCCTAAGGTGAGATCTAATGCAGCTTCAGTATTGGAGCTGCTTCTGCAAGCAAAAATTGTTCATCCCATATACTTTTATCCCATCGCTGACGTAGTCCTGGAAAAACTTGGTGATCCAGATAATGAAATAAAAAACTCATTCGTGAGGTTGCTTTCTCATATTTTGCCCACGGCACTTTATGCATGTGGTCAATATGACCTTGGATCATATCCTGCTTGTAGGCTTCATCTTCTGAGATCTGATCATAAATCTAGCCTGCACTGGAAACAAGTATTTGCCTTGAAGCAGCTTCCTCAGCAAATTCATTTTCAACAACTAATTTCCATTTTGAGCTACATATCACAAAGATGGAAAGTTCCTGTTGCATCATGGACCCAGCGGCTCATCCATAGATGTGGGAGATTGAAAGACATTGATTTGAGTCAAAGTGAGGAGATGGGGAACCTAGGTGCAAATGGTTTATGGTTAGATCTCAGGCTGGATGATGATTTTCTTAATGGGAATTGCTCAGTTAATTGTGTAGCCGGAGTCTGGTGGGCCATCCATGAAGCAGCTAGATACTGTATTTCTCTACGTCTACGAACGAACCTTGGTGGGCCTACCCAGACTTTTGCAGCACTAGAGAGAATGCTTTTGGACATAGCACACTTGTTACAGCTTGATAATGAACATAGTGATGGGAATTTAACCATGGTTGGGGCTTCTGGAGCCCGTTTATTGCCCATGAGGTTACTATTGGATTTTGTTGAGGCCTTAAAGAAAAATGTTTATAATGCATATGAGGGGTCTGCAGTCTTATCACCTGCTACTCGCCAAAGTTCATTGTTTTTCCGAGCAAACAAGAAAGTTTGTGAGGAGTGGTTTTCACGTATGTGTGAGCCAATGATGAATGCTGGATTGGCACTTCAAAGCCAATATGCTGCAATCCAATATTGTACGCTGCGTTTGCAAGAGTTCAAGAATCTTGTTATGTCACATATGAAGGAAAAGTGTAATTTACAGGTCGGTGAAAACATCCACAACACAAATAAACTTACAAGAGATATCTCAAGGGTTTTGAGGCACATGACTTTGGCTCTTTGTAAAAGTCATGAAGCAGAAGCTTTGGTTGGTCTACAGAAATGGGTTGAAATGACATTCTCTTCCCTGTTTCTGGAGGAAAGCCAGAGTCTTGGTAACTTTACACTAGGACCCTTTTCATGGATTACAGGGCTAGTCTATCAAGCAAGAGGTCAATATGAAAAAGCAGCTGCTCACTTTATCCACTTGTTACAGACTGAAGAGTCACTTGCTTCTATGGGTTCTGATGGTGTACAGTTCACCATTGCTCGTATTATTGAGGGATATACAGCTATGGCTGATTGGACATCTCTGGAATCATGGTTATCGGAGTTGCAATCTCTTCGTTCTAAACATGCTGGGAAGAGCTACTCTGGTGCTCTAACTACAGCTGGCAATGAAATAAATGCAATCCATGCATTGGCACACTTTGATGAAGGAGATTATGAGGCATCATGGGCATGTCTTGGTTTGACACCAAAGAGTAGCAGTGAGCTAACTCTAGATCCCAAGCTGGCTTTGCAGAGGAGTGAGCAGATGCTTTTACAGGCACTGCTTCTCTATAATGAGGGAAGGTTGGAAAAGGTGTCCCAAGAAATCCAGAAGGCAAGAGCAATGCTGGAGGAAACGTTGTCAGTCTTGCCTCTGGATGGCTTGGAAGAAGCAGCTGCATTTGCTACACAATTACATAGCATTTCTGCATTTGAAGAAGGTTACAAGCTTACAGGCAGTGTAGACAAGCACAAACAGTTAAATTCAATATTGAGTGTTTATGTTCAGTCTGTGCAATCTTCTTTTTGTAGAATTAATCAAGATTGCAACCCATGGATAAAAATTCTTCGGGTTTATCGAGTGATCTCACCAACTTCTCCAGTCACCCTTAAACTCTGCATTAATTTGTTAAGTTTGGCTCGTAAACAGAAAAACCTGATGTTGGCAAATAATTTAAACAATTATATTGATGACCATATATCAAATTGTTCTGATGAAAAGCATTGTCTATTTCTCCTTTCAAGTTTGCAGTATGAGAGAATCTTGTTAATGCAAGCTGAGAATAGATTTGAAGATGCTTTCACAAATATCTGGTCCTTTGTGCATCCTCACATCATGTCTTTCAACTCAATTGAGTCGAACTTTGATGATGGTATTTTGAAAGCAAAAGCATGCTTAAAACTTTCTCGTTGGTTAAAACAGGATTTAGAAGCTTTGAACTTGGATCATATTATACCTAAGCTGATTGCTGATTTTAATGTGACTGACAAATCCTCTGTAAGAGGAGAATTCTCCATCTGTAGTGAGAACTTACATTCTGGACCTGGACCAAGTATAGAACTTATCATTGAGGAGATTGTGGGTACGATGACTAAATTATCCACTCGTCTTTGTCCTACATTTGGTAAGGCATGGATTTCTTATGCATCTTGGTGCTTTGCTCAAGCTGAAAGTTCTCTCCATACTTCAAGTGGAACTGCTCTCCGCTCATGCTTGTTTTCTTCTATACTAGATCCTGAAGTTCATTCTGAGAAATATAGACTAACTAAAGATGAAATCATAAAAGTGGAACGCCTGATTTATGTTCTCGTTCAGAAAAGTCATGAAGCAAAAATTGTTAATGATGATCGAAGAGAATGGAGTTCTGAGACCTTAGAGGATTTGAAACTTGATGGCACTGTCAAGGCCTTGTTGCAGCAAGTAATAAATATCATCGAGGCTGCAGCTGGTTTGTCAAATACTGAAAACCCTGGGAATGAATGCCTAACTGATGTCTTTACTTCTGAGTTAAAGTTATTTTTTCAGCATGCTAGTATTGACCTAGATGACACTAGCGCGGTAACCGTTGTTCAGGACTTGGTAGATGTTTGGAGGTCCCTGAGGAGTAGAAGAGTGTCTCTCTTTGGTCATGCTGCTAATGGCTTTATACAATATCTTTTGCATTCCTCTATAAAAGCTTGTGATGGTCAGCTGGCGGGCTATGACTGCGGGTCAATGAAACAGAAGTCTGGAAAATACACACTGAGGGCGACATTGTACGTTCTACATATTCTTCTCAATTATGGAGCCGAGTTAAAAGATTCTCTTGAACCTGCTCTATCAACAGTCCCACTCTCTCCATGGCAGGAAGTGACACCACAGTTATTTGCTCGCCTGAGTTCTCATCCTGAGAAAATTGTGAGGAAGCAGTTGGAGGGATTGGTGATGATGCTGGCTAAGCAGTCTCCATGGTCTGTAGTATACCCAACGCTGGTTGACGTAAATTCTTATGAAGAGAAGCCTTCAGAGGAACTTCAGCATATACTTGGTTCTCTGAAAGAGCATTATCCAAGATTGATCGAAGATGTTCAATTGATGATAAAAGAGCTGGAAAATGTAACTGTACTTTGGGAAGAGCTATGGCTCAGCACACTTCAAGATCTTCAGACAGATGTTATGAGACGCATAAATGTACTCAAGGAAGAAGCTGCTCGAATTGCTGCAAATGTCACTCTCAGCCAGAGTGAGAAAGACAAGATAAATGCTGCTAAGTACTCAGCCATGATGGCCCCCATTGTGGTGGCTTTGGAGCGTCGTTTGGCTTCAACATCTCGAAAACCTGAAACACCCCATGAAACCTGGTTCCATGAAGAGTATAAAGAACAGCTGAAATCAGCTATTTTTACCTTCAAGAATCCTCCATCCTCTGCTGCTGCACTTGTTGATGTATGGCGGCCATTTGATGATATTGCAGCATCTTTGGCATCTTATCAGAGAAAGTCATCAATTTCTTTAAAAGAAGTTGCACCGATGTTAACTTTGTTATCATCATCTGACGTACCAATGCCTGGTTTTGAGAAGCATGTTATCTATTCAGAAGCTGATAGAAGCATTGGCTCTAATCTTTCAGGAACTGTTACAATTGGTTCTTTCTCAGAGCAAGTGACTATCTTGTCTACAAAGACAAAACCTAAAAAGCTTGTAATACTGGGTTCTGATGGTGAAACCTACACATATCTCTTAAAGGGTAGAGAGGATCTGCGTCTTGATGCTAGAATCATGCAAATGTTGCAAGCTATCAATAGTTTCCTGTATTCATCTCATTCAACTTATGGTCAATCTCTCTCCATTCGCTATTATTCTGTAACTCCAATTAGTGGTAGAGCTGGTCTCATCCAATGGGTGAACAATGTAATGAGTGTATATACTGTATTCAAGTCATGGCAACACCGGGTCCAGGTGGCACAACTCTCAGCAGTTGGTGCTAGCAATTTGAAAAGTTCTGTACCTCCACAGCTTCCACGTCCGAGTGATATGTTTTATGGTAAAATCATACCAGCACTCAAAGAGAAAGGCATAAGGAGAGTGATTTCACGTAGAGATTGGCCTCATGAAGTTAAACGTAAAGTTCTTTTGGATCTTATGAAGGAGGTTCCCAAACAACTTCTTTATCAAGAACTCTGGTGTGCTAGTGAAGGATTCAAAGCTTTCAGTTTGAAACTAAAAAGGTATGCTGGAAGTGTTGCAGCAATGAGTATGGTGGGACACATCTTGGGCTTAGGCGATAGACATCTGGATAATATTCTTATGGATTTCTCTACTGGAGATGTTGTACATATTGACTATAATGTTTGTTTTGATAAAGGCCAGAAACTGAAAGTGCCAGAGATTGTTCCCTTTCGTCTCACCCAAACTATGGAAGCAGCTTTAGGACTGACAGGAATAGAAGGGACCTTCAGAGCAAACTGTGAGGCTGTGCTAGAAGTTCTGAGAAAGAACAAAGATATACTCCTAATGCTGCTAGAAGTTTTTGTGTGGGATCCTCTTGTGGAATGGACCCGTGGTGATTTCCATGATGATGCCACTATAGGTGGTGAAGAAAGAAGAGGCATGGAGTTGGCTGTTAGCTTGAGTCTATTTGCATCTCGTGTGCAGGAAATTCGTGTCCCCTTGCAGGAGCATCATGATCTTTTATTGGCTGCCCTACCTGCTGCTGAGTCTTCTCTTGAGGGGTTTGCAAATGTCCTAAATCACTATGAGCTTGCCTCTACGCTCTTTTATCAAGCTGAACAAGAAAGATCAAGCATAGTTTTGCGTGAAACATCAGCTAAGTCAGTTGTTGCTGATGCAACATCTAGTGCAGAGAAAGTTCGTACACTATTTGAAATGCAGGCTCGAGAGCTTGCTCAAGGTAAGGCTATTGTTTCTGAGAAAGCTCAAGAGGCATCAACCTGGATTGAGCAACATGGAAGAGTCCTTGATAATATAAGGAGCAATTTGATTCCCGAAATAGACATGTGTTTGAATATGAGAGCAATTGGAGAAGCTTTGTCACTTATATCTGCCGTTACGGTGGCTGGAGTTCCAGTGACAGTTGTACCTGAGCCCACTCAAGTGCAATGTCATGATATAGATAGGGAGATTTCTCAGCTTATAGCTGCACTAAGCGATGGACTTTCTTCTGCTATAGCTACAATTCAAGTTTATTCTGTTTCTTTGCAGAGATTTCTTCCTCTAAACTATGTAACGACTAGTGTAGTTCATGGCTGGGCTCAGGCTTTACAATTATCTAAGAATGCCCTCTCCTCTGATATTATTTCACTTGCTAGAAGACAGGCTACTGAACTTATGATGAAAGTAAATGATAATAATGATTCTGTACAAGTCAGTCATGACAATATGTGTGTTCAAGTGGATAAGTACGCAAAGGAAATTGCAAAAATTGAAGAAGAGTGTACTGAGCTCTTGACCTCTATTGGTACAGAAACGGAATTGAAAGCTAAGGATCGGCTTCTATCAACTTTTACTAAATATATGACGTCTGCTGGCCTTGTAAAGAGAGAAGCTATTCCATCTCTCCAGATGGGACGAGTTACACATGATGGGAAAAAGGACATCAACATGCAGCTGGAGCTTGTGGCAGAAAAGGAGAAAAAGGAAAAGCTACTATCTAGTATTAACGTTGCTCTGGATATTCTATACTGTGAGGCAAGAGGAAAAATACTGGACATTTTGAATGATATGAATGATGGGAGACTAGTGAATAGAACTACATCTCATGATTTTAATGTTGTTTTCTCCAATCTAGAAGAGCAAGTGGAGAAATGTATGCTTTTGTCAGAGTTTCATTCTGAATTATTGGATTTGATTGATGTTAAGGTGCTGAGTGTTGAAAACAAATATAAAAGTTGGCATAGGAATCATTCTCATAGAAATTGGACTTCTACTTTTGCTGTCATGTTCTCTTCTTTCAAAGACCTGATAGGGAAAATGACTGATGCTGTTCTACCTGATATAATTAGATCTGCTATTTCGGTGAATTCAGAAGTTATGGATGCATTTGGGCTGGTCTCACAAATTCGAGGATCAATTGATACAGCACTAGATCAGTTTCTTGAGGTTCAATTAGAGAAGGCTTCGTTAATTGAATTGGAAAAAAATTATTTTATCAATGTTGGCCTCATTACAGAGCAGCAGTTGGCCCTTGAGGAAGCTGCTGTAAAGGGCAGGGATCATCTCTCTTGGGAAGAGGCCGAGGAGCTTGCTTCAGAGGAGGAAGCTTGCAGGGCAGAACTGCATCAACTCCATCAAACATGGAACCAGAGAGATGTACGCAGCTCGTCTCTTGCAAAGAGGGAGGCTAATTTAGTACATGCTTTGGCTTCATCGGAATGCCAGTTTCAATCTCTTATCAGTGCTGCAGTGGAGGAGACTTTTACGAAAGGCAACACCTTATTGGCCAAATTAGTTAAACCATTCTCTGAACTGGAATCTATTGATGAAATCTGGTCTTCCTCTGGAGTTTCTTTTTCATCTATCTCAAATGGGATTCCTACTTTGTCAGATGTGGTGAGTTCTGGGTATCCAATATCTGAATATATTTGGAGGTTTGGTGGACAATTAAGCAGTCATTCTTTCTTTATTTGGAAAATTTGTGTTGTGGATTCTTTCCTTGATTCGTGCATACATGAAATTGCTTCAGCCGTGGATCAGAATTTCGGATTTGATCAGCTCTTTAATGTTATGAAGAAAAAACTTGAGCTTCAGCTTCAAGAATATATTTTTAGGTACCTTAAAGAACGGGGTGTTCCTGCATTCTTGGCTTGGCTGGATAGAGAAAGGGAACATTTAAAACCACTGGAGGCAAGAAAAGACAATTTCCATGAACACCATGATGAACAAATTAAAGATTTGGAATTTATTGAGAGGATCCGATACATGCTGCAGGAACACTGTAATGTGCATGAAACTGCCAGAGCAGCAAGGTCTACAGTTTCACTTATGAGAAAACAGGTGAATGAGCTCAAAGAAACTCTTCAGAAGACTAGTCTGGAAATTATTCAAATGGAGTGGTTACATGACAATAGTTTGACTCCATCACAATTTAATAGGGCCACCTTGCAAAAATTTCTCTCTGTTGAGGATAGGTTATACCCTATTATTCTAGACCTTAGCCGATCTGAATTGCTGGGAAGTTTGCGATCGGCTACTTCAAGGATAGCTAAGTCAATTGAAGGCCTAGAAGCTTGTGAGCGAGGCTCTCTTACAGCTGAAGCACAGCTGGAGAGAGCAATGGGGTGGGCTTGTGGTGGCCCAAATACTGGTCCGGTGATAAATACTTCTAAGGCTTCAGGGATTCCTCCTCAATTCCATGACCATATCTTGAGGCGGAGGCAGTTGTTATGGGAAACTAGAGAAAAGGTATCAGATATTATTAAGATTTGCATGTCTATATTGGAATTTGAAGCATCAAGAGATGGCATGCTTCAATTTCCAGGAGACCATGCTTTTAGTACAGATAGTGATAGCAGGGCATGGCAGCAAGCTTACTTGAATGCAATAACAAGACTGGATGTTTCTTATCATTCCTTTTCCCGTACTGAACAAGAATGGAAGCTTGCAGAAAGAAGCATGGAGGCTGCCTCAAACGAATTATATGCTGCAACCAATAATCTTCGCATTGCTAATCTTAAAATGAAGTCCGCTTCAGGTGATTTACAAAGCACTCTTCTCAGTATGAGAGATTGTGCATATGAATCAAGTGTTGCACTCTCAGCATTTGGTAGTGTCTCAAGGAACCACACTGCATTGACCTCTGAGTGTGGTTCTATGCTTGAAGAGGTACTAGCAATAACCGAAGATCTGCATGATGTTCATAATTTGGGAAAGGAGGCTGCTGTAATTCATCGTCAACTTATTGAAGACATTGCGAAGGCAAATTCAGTCCTCCTTCCCCTTGAGGCAATGTTATCCAAGGATGTTGCTGCCATGATTGATGCTATGGCTAGAGAAAGAGAAATCAAGATGGAAATATCACCTATACATGGACAAGCTATATATCAGTCCTATTGTTTGAGAATTAGAGAGGCCTATCAGATGTTCAAGCCTTTGGTCCCTTCTCTGACATTATCTGTGAAGGGTCTGTATTCCATGTTTACCAAGCTTGCACGAACAGCAGGTCTCCATGCTGGAAATCTTCATAAAGCTCTTGAAGGACTAGGAGAAAGCCAGGAAATTAAGTCAGAGGGAATTCACATAACTAAGTCTCAGTTCAATAGTGAAGTAGATGCAGTTGACTTCGAAAAGGAGAGAGAAAGCCTCTCCTTGTCTGATAGTGAGAGTAGCGGAGATATCCCTGATATTACCAGACTTTCTTTGCAAGATAAAGAATGGTTATCTCCACCTGATAGCTTCTGCAGCAGCAGCTCTGAGTCTGACTTCACCACTAGTAGCTTTCCAGATAGCTCCAACGACCTAACAGAGGATATGGGTCAACACTATAACGGGTCTAGTGACAGAGAAGCTAGAGTTATTCCAAAAATTACCTCATTTTCTCAAACTGACGTTGGAAAAATGTTACGTTTGGAGGAGTCAGAAACAAAATCCACAGATGGTAGCCAAACCTGTTTTAGAAAGTTATCAACCAATGAGTTCAATGGAGGAATTAAAATTGTTGCAACACCACCTGATGAATCTATTGAAGTTCCTGCTATTGCGTCACATCCGTTGAATGAGACTGTTGAAAGACTGGAGGAGGAAAGTGGTGTAACCTCATCAGATAAGAGATTAGAAGATGAAAATCAAGAGGCTCCTCCAGCTCAGAAGGCTGCTTGGAGTCGTGCAAGCAGGGGTAGAAATGCATACGCAACGTCTGTTTTACGGCGTGTAGAGATGAAACTCAATGGAAGAGACAATGTCGATAACAGAGAACTTAGCATTGCTGAGCAAGTGGATTATCTACTTAAGCAAGCAACGAGTGTAGACAACCTGTGCAACATGTATGAAGGTTGGACCCCATGGATTTGA 12852 40.77 MDNSLTAMPESNEQEGAQSFNQTSPARRAGLFYKLVVPSILQDKKLKIPNKFAKKFGGDILDLVTLVAPNGYRWVLELKRHGRSMWFEDGWHEFVKHHCIQVGQLLVFRFEGNSVFNFYMFNLTAIPNGPCNTSNASIEQNDGEQCPDTLGKEAEYKKLVEILGTGSPDPSPRPSVKDLVCEFPDQQKFNGSCNGTSIKNFMHWFDTENLHPLKDFDNPLKHLDKLRMQLLNSNRDIGIQFDGDELAKARENHDFQLNQSSDEREEGAMKKKLKLEPIDYYNDNEPIDEKKCGNVPHKINRMAFGVEEFKFGNPFCWIVMRQSYIRRGFHLHIPSKFAEKYLKGVWGDITLQVSSGKQWRVRCIREGPGTKLTRGWADFVVDNDLKEEDVCVFELINMKDIVMQVTVFRVHGNWKNPNWNIQFIVMQLCWNFSPKTDDNEVLVYTTPCCCSLSFLDLAGASSQSSFPSNYDYSVNEIPWRRMMQGLHHQQQQLAALLNVALRKDDPNPTTSSSSTAGATSDEDDSARIAAINSIHRAIVYPPNSLLVTHSATFLSQGFSQLLSDKSYPVRQAAAIAYGALCAVSCSITASPNGRQNSVLLGTLVDRFIGWALPLLSHVTAGDATTKLALEGLQEFINIGEAGAVERFALPILKACQVLLEDERTPLSLLHGLLGVLTLISLKFSRSFQPHFLDIVDLLLGWALVPDLTDSDRHIIMDSFLQFQKHWVGNLQFSLGLLSKFLGDMDVLLQDGSPGTPQQFRRLLALLSCFSTILRSAASGLLELNLLEQISEPLSRMLPQLLGCLSMVGRKFGWLEWIDNLWKCLTLLAEILRERFSTYYPLAIDILFQSLEMTRANRVVKGQKITFLQVHGVLKTNLQLLSLQKFGLLPSSVHRILQFDAPISQLRMHPNHLVTGSSAATYIFLLQHGNNEVVEQTVALLIEELGMFSGLLEKGLDQRGINGILDSQFCSTMDLFALIKFDLRALLTCTISSGTIGLIGQENVAFTCLKRSERLISFIMEKLNPFDFPLQAYVELQAAILDTLDRLTTTEFFCKCSLKKLSSENRFLDSGENIDSYQKKGENIDEAHLKKDHSAIIIEQLTKYNALFSKALHKASPLTVKITTLGWIQRFCENVVTIFKNDKTYANFFEEFGYFSVIGNLIFMVIDAASDREPKVRSNAASVLELLLQAKIVHPIYFYPIADVVLEKLGDPDNEIKNSFVRLLSHILPTALYACGQYDLGSYPACRLHLLRSDHKSSLHWKQVFALKQLPQQIHFQQLISILSYISQRWKVPVASWTQRLIHRCGRLKDIDLSQSEEMGNLGANGLWLDLRLDDDFLNGNCSVNCVAGVWWAIHEAARYCISLRLRTNLGGPTQTFAALERMLLDIAHLLQLDNEHSDGNLTMVGASGARLLPMRLLLDFVEALKKNVYNAYEGSAVLSPATRQSSLFFRANKKVCEEWFSRMCEPMMNAGLALQSQYAAIQYCTLRLQEFKNLVMSHMKEKCNLQVGENIHNTNKLTRDISRVLRHMTLALCKSHEAEALVGLQKWVEMTFSSLFLEESQSLGNFTLGPFSWITGLVYQARGQYEKAAAHFIHLLQTEESLASMGSDGVQFTIARIIEGYTAMADWTSLESWLSELQSLRSKHAGKSYSGALTTAGNEINAIHALAHFDEGDYEASWACLGLTPKSSSELTLDPKLALQRSEQMLLQALLLYNEGRLEKVSQEIQKARAMLEETLSVLPLDGLEEAAAFATQLHSISAFEEGYKLTGSVDKHKQLNSILSVYVQSVQSSFCRINQDCNPWIKILRVYRVISPTSPVTLKLCINLLSLARKQKNLMLANNLNNYIDDHISNCSDEKHCLFLLSSLQYERILLMQAENRFEDAFTNIWSFVHPHIMSFNSIESNFDDGILKAKACLKLSRWLKQDLEALNLDHIIPKLIADFNVTDKSSVRGEFSICSENLHSGPGPSIELIIEEIVGTMTKLSTRLCPTFGKAWISYASWCFAQAESSLHTSSGTALRSCLFSSILDPEVHSEKYRLTKDEIIKVERLIYVLVQKSHEAKIVNDDRREWSSETLEDLKLDGTVKALLQQVINIIEAAAGLSNTENPGNECLTDVFTSELKLFFQHASIDLDDTSAVTVVQDLVDVWRSLRSRRVSLFGHAANGFIQYLLHSSIKACDGQLAGYDCGSMKQKSGKYTLRATLYVLHILLNYGAELKDSLEPALSTVPLSPWQEVTPQLFARLSSHPEKIVRKQLEGLVMMLAKQSPWSVVYPTLVDVNSYEEKPSEELQHILGSLKEHYPRLIEDVQLMIKELENVTVLWEELWLSTLQDLQTDVMRRINVLKEEAARIAANVTLSQSEKDKINAAKYSAMMAPIVVALERRLASTSRKPETPHETWFHEEYKEQLKSAIFTFKNPPSSAAALVDVWRPFDDIAASLASYQRKSSISLKEVAPMLTLLSSSDVPMPGFEKHVIYSEADRSIGSNLSGTVTIGSFSEQVTILSTKTKPKKLVILGSDGETYTYLLKGREDLRLDARIMQMLQAINSFLYSSHSTYGQSLSIRYYSVTPISGRAGLIQWVNNVMSVYTVFKSWQHRVQVAQLSAVGASNLKSSVPPQLPRPSDMFYGKIIPALKEKGIRRVISRRDWPHEVKRKVLLDLMKEVPKQLLYQELWCASEGFKAFSLKLKRYAGSVAAMSMVGHILGLGDRHLDNILMDFSTGDVVHIDYNVCFDKGQKLKVPEIVPFRLTQTMEAALGLTGIEGTFRANCEAVLEVLRKNKDILLMLLEVFVWDPLVEWTRGDFHDDATIGGEERRGMELAVSLSLFASRVQEIRVPLQEHHDLLLAALPAAESSLEGFANVLNHYELASTLFYQAEQERSSIVLRETSAKSVVADATSSAEKVRTLFEMQARELAQGKAIVSEKAQEASTWIEQHGRVLDNIRSNLIPEIDMCLNMRAIGEALSLISAVTVAGVPVTVVPEPTQVQCHDIDREISQLIAALSDGLSSAIATIQVYSVSLQRFLPLNYVTTSVVHGWAQALQLSKNALSSDIISLARRQATELMMKVNDNNDSVQVSHDNMCVQVDKYAKEIAKIEEECTELLTSIGTETELKAKDRLLSTFTKYMTSAGLVKREAIPSLQMGRVTHDGKKDINMQLELVAEKEKKEKLLSSINVALDILYCEARGKILDILNDMNDGRLVNRTTSHDFNVVFSNLEEQVEKCMLLSEFHSELLDLIDVKVLSVENKYKSWHRNHSHRNWTSTFAVMFSSFKDLIGKMTDAVLPDIIRSAISVNSEVMDAFGLVSQIRGSIDTALDQFLEVQLEKASLIELEKNYFINVGLITEQQLALEEAAVKGRDHLSWEEAEELASEEEACRAELHQLHQTWNQRDVRSSSLAKREANLVHALASSECQFQSLISAAVEETFTKGNTLLAKLVKPFSELESIDEIWSSSGVSFSSISNGIPTLSDVVSSGYPISEYIWRFGGQLSSHSFFIWKICVVDSFLDSCIHEIASAVDQNFGFDQLFNVMKKKLELQLQEYIFRYLKERGVPAFLAWLDREREHLKPLEARKDNFHEHHDEQIKDLEFIERIRYMLQEHCNVHETARAARSTVSLMRKQVNELKETLQKTSLEIIQMEWLHDNSLTPSQFNRATLQKFLSVEDRLYPIILDLSRSELLGSLRSATSRIAKSIEGLEACERGSLTAEAQLERAMGWACGGPNTGPVINTSKASGIPPQFHDHILRRRQLLWETREKVSDIIKICMSILEFEASRDGMLQFPGDHAFSTDSDSRAWQQAYLNAITRLDVSYHSFSRTEQEWKLAERSMEAASNELYAATNNLRIANLKMKSASGDLQSTLLSMRDCAYESSVALSAFGSVSRNHTALTSECGSMLEEVLAITEDLHDVHNLGKEAAVIHRQLIEDIAKANSVLLPLEAMLSKDVAAMIDAMAREREIKMEISPIHGQAIYQSYCLRIREAYQMFKPLVPSLTLSVKGLYSMFTKLARTAGLHAGNLHKALEGLGESQEIKSEGIHITKSQFNSEVDAVDFEKERESLSLSDSESSGDIPDITRLSLQDKEWLSPPDSFCSSSSESDFTTSSFPDSSNDLTEDMGQHYNGSSDREARVIPKITSFSQTDVGKMLRLEESETKSTDGSQTCFRKLSTNEFNGGIKIVATPPDESIEVPAIASHPLNETVERLEEESGVTSSDKRLEDENQEAPPAQKAAWSRASRGRNAYATSVLRRVEMKLNGRDNVDNRELSIAEQVDYLLKQATSVDNLCNMYEGWTPWI* 4284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11920558 11947853 + CsaV3_2G014290.1 Csa02g01213 519270

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01213 4283 Pfam Phosphatidylinositol 3- and 4-kinase 2519 2795 IPR000403 -
Csa02g01213 4283 Coils Coil 3073 3100 - -
Csa02g01213 4283 MobiDBLite consensus disorder prediction 4189 4224 - -
Csa02g01213 4283 Coils Coil 3600 3627 - -
Csa02g01213 4283 MobiDBLite consensus disorder prediction 4077 4108 - -
Csa02g01213 4283 ProSiteProfiles FAT domain profile. 1652 2278 IPR014009 -
Csa02g01213 4283 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 528 4283 - -
Csa02g01213 4283 SMART FATC_2 4251 4283 IPR003152 GO:0005515
Csa02g01213 4283 SUPERFAMILY ARM repeat 414 1228 IPR016024 -
Csa02g01213 4283 SUPERFAMILY Protein kinase-like (PK-like) 2453 2798 IPR011009 -
Csa02g01213 4283 SUPERFAMILY DNA-binding pseudobarrel domain 310 411 IPR015300 -
Csa02g01213 4283 Gene3D - 2660 2818 IPR036940 GO:0016301
Csa02g01213 4283 Gene3D - 299 412 IPR015300 -
Csa02g01213 4283 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 2493 2834 IPR000403 -
Csa02g01213 4283 SMART pi3k_hr1_6 2520 2857 IPR000403 -
Csa02g01213 4283 MobiDBLite consensus disorder prediction 1 21 - -
Csa02g01213 4283 CDD B3_DNA 31 122 IPR003340 GO:0003677
Csa02g01213 4283 MobiDBLite consensus disorder prediction 4077 4114 - -
Csa02g01213 4283 MobiDBLite consensus disorder prediction 4189 4211 - -
Csa02g01213 4283 Pfam B3 DNA binding domain 37 118 IPR003340 GO:0003677
Csa02g01213 4283 Pfam B3 DNA binding domain 319 409 IPR003340 GO:0003677
Csa02g01213 4283 SMART Rapamycin_bind_3 2311 2432 - -
Csa02g01213 4283 Coils Coil 1718 1738 - -
Csa02g01213 4283 PANTHER OS03G0738200 PROTEIN 528 4283 - -
Csa02g01213 4283 Pfam Serine/threonine-protein kinase smg-1 1097 1673 IPR031559 GO:0000184|GO:0004674|GO:0016310
Csa02g01213 4283 ProSiteProfiles FATC domain profile. 4251 4283 IPR003152 GO:0005515
Csa02g01213 4283 ProSiteProfiles B3 DNA-binding domain profile. 31 124 IPR003340 GO:0003677
Csa02g01213 4283 CDD B3_DNA 314 409 IPR003340 GO:0003677
Csa02g01213 4283 CDD PIKKc_SMG1 2490 2796 IPR039414 GO:0000184|GO:0004674
Csa02g01213 4283 Gene3D - 27 124 IPR015300 -
Csa02g01213 4283 Pfam FATC domain 4253 4282 IPR003152 GO:0005515
Csa02g01213 4283 SMART B3_2 32 124 IPR003340 GO:0003677
Csa02g01213 4283 SMART B3_2 316 411 IPR003340 GO:0003677
Csa02g01213 4283 Gene3D - 2434 2577 - -
Csa02g01213 4283 SUPERFAMILY DNA-binding pseudobarrel domain 31 122 IPR015300 -
Csa02g01213 4283 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 2689 2709 IPR018936 GO:0016301
Csa02g01213 4283 ProSiteProfiles B3 DNA-binding domain profile. 316 411 IPR003340 GO:0003677
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01213 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] - csv:101222679 7264.08
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01213 Csa-Chr2:11920558 Csa07g00668 Csa-Chr7:4752118 2.34E-65 dispersed
Csa06g02895 Csa-Chr6:25161690 Csa02g01213 Csa-Chr2:11920558 1.04E-08 dispersed
Csa02g01212 Csa-Chr2:11910406 Csa02g01213 Csa-Chr2:11920558 1.08E-60 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g525 . . . . . . . . . . . Cma20g00881 . Car20g00759 . . . . . . . . . . . . . . . . . . . . . Lsi10g00324 . Chy11g00422 . . . . . . . . . . . Cmo20g00889 . . . . . . Bhi10g02063 . . . Hepe08g1050 . . Cla09g01732 Cam09g1827 Cec09g1887 Cco09g1980 . . Cre01g0682 . Csa02g01213 . Cme11g00489
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011498 0 3 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 2 1 1 1 1 1 30
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30922 PF15785 SMG1 1.50E-42 No_clan Csa TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Csa02g01213 Csa_Chr02 FPKM 2.789417 2.37443 24.590254 21.437593 37.65799 36.80217 35.538193 26.366955 25.498137 27.013252