Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01360 ATGGCGGCGACTGTCTCACCGTGGGGAAAGCCTGGAGCATGGGCTTTGGATGCGGAGGAGCACGAGGCAGAGCTTCTCAAGGACCAGGAGGAACAGTCTCGCCACCAGGAGGAACCCAGTGCTGACTTTCCATCCCTTGCCGCCGCGGCCGCCACCAAGCCTAAGAAGAAGAAAGGTCAGTCTATTCCTTTGTCGGAGTTTCAGACTTATGGGGGTCCAAAGCCGTCCGCTCAATCCAGTGATCCGAAGGGTCTTACGGCTGAAGATCTAATGATGCTTCCCACGGGTCCTCGTCAGAGAACGGCGGAGGAAATGGACCGTAACCGTCTTGGTGGTGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAACTCGGAAGATTCGCCGAATTCTCGACGGAGTTCTAGGGTTTTTGATGAGTCAAGGAGGACTAATGATGGATCTGATAGAGAATTCAGAAGGGAATCGTTACCCTCTAGGGCTGATGAGATTGATGATTGGGGAGCCGGGAAGAAGCCTATGGTGGGTAATGGGTTTGAGAGGAGAGAGAGAGGAGGAGGTGGAGGTTTTTTCGATTCGCACTCGTCGAAAGCCGATGAATCGGATAGTTGGGTATCAAGCAAGAGCTTTACACCTTCTGAAGGACGGAGATCAGGCGGTTTTGACAGAGAGCGAAGAGGAGGATTTCCCACGAGCGGCGGTGGCGCCGATTCAGACAATTGGGGCAGAAAGCCTGATGGGGCTAGAGGTGGAATTGGTGAAAATGGTGGTAGCGCTGATTCAGAGAATTGGGGCAAAAGATCTGAAGGGGTTAGAAGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCAATCCCTTTGAACAATGGTAATCAGGAGGCTTCTGGTGTTGCAGTAAAGCCAAAGGGGTCTAATCCTTTTGGAAATGCAAGACCAAGGGAAGAGGTATTGGCTGAAAAGGGGCAGGATTGGAAGAAAATTGATGAGCAACTCGAATCGGTGAAAATTAAGGACACGGTTGAAAGGGCAGAGACATCTAGTGGAGCTTCGTTTGAAAGAAAAAAAGGCTTTGGAGCTCGAAGTGGTCGGTCTCCGGATTCGGGAAGGACTTGGAGGAAGCCGGAGTCTGTGGAGTCTCGTCCCCAAAGTGCTGAATTGGTTGAAGATGGACCTGCTGAGGAAAATTGA 1218 51.31 MAATVSPWGKPGAWALDAEEHEAELLKDQEEQSRHQEEPSADFPSLAAAAATKPKKKKGQSIPLSEFQTYGGPKPSAQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQNSLYDRGNRYSNSEDSPNSRRSSRVFDESRRTNDGSDREFRRESLPSRADEIDDWGAGKKPMVGNGFERRERGGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPTSGGGADSDNWGRKPDGARGGIGENGGSADSENWGKRSEGVRSGIGERPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWKKIDEQLESVKIKDTVERAETSSGASFERKKGFGARSGRSPDSGRTWRKPESVESRPQSAELVEDGPAEEN* 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13099403 13103036 + CsaV3_2G015760.1 Csa02g01360 519417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01360 405 Coils Coil 16 38 - -
Csa02g01360 405 MobiDBLite consensus disorder prediction 62 83 - -
Csa02g01360 405 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 389 IPR010433 GO:0003743
Csa02g01360 405 Pfam Plant specific eukaryotic initiation factor 4B 7 379 IPR010433 GO:0003743
Csa02g01360 405 MobiDBLite consensus disorder prediction 366 389 - -
Csa02g01360 405 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 389 - -
Csa02g01360 405 MobiDBLite consensus disorder prediction 323 352 - -
Csa02g01360 405 MobiDBLite consensus disorder prediction 139 176 - -
Csa02g01360 405 MobiDBLite consensus disorder prediction 120 138 - -
Csa02g01360 405 MobiDBLite consensus disorder prediction 18 405 - -
Csa02g01360 405 MobiDBLite consensus disorder prediction 18 38 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa02g01360 Csa07g00084 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01360 Csa-Chr2:13099403 Csa02g01779 Csa-Chr2:17252709 1.69E-32 dispersed
Csa02g01360 Csa-Chr2:13099403 Csa07g00084 Csa-Chr7:796525 9.37E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01360 - - csv:101214573 791.956