Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g01360 | ATGGCGGCGACTGTCTCACCGTGGGGAAAGCCTGGAGCATGGGCTTTGGATGCGGAGGAGCACGAGGCAGAGCTTCTCAAGGACCAGGAGGAACAGTCTCGCCACCAGGAGGAACCCAGTGCTGACTTTCCATCCCTTGCCGCCGCGGCCGCCACCAAGCCTAAGAAGAAGAAAGGTCAGTCTATTCCTTTGTCGGAGTTTCAGACTTATGGGGGTCCAAAGCCGTCCGCTCAATCCAGTGATCCGAAGGGTCTTACGGCTGAAGATCTAATGATGCTTCCCACGGGTCCTCGTCAGAGAACGGCGGAGGAAATGGACCGTAACCGTCTTGGTGGTGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAACTCGGAAGATTCGCCGAATTCTCGACGGAGTTCTAGGGTTTTTGATGAGTCAAGGAGGACTAATGATGGATCTGATAGAGAATTCAGAAGGGAATCGTTACCCTCTAGGGCTGATGAGATTGATGATTGGGGAGCCGGGAAGAAGCCTATGGTGGGTAATGGGTTTGAGAGGAGAGAGAGAGGAGGAGGTGGAGGTTTTTTCGATTCGCACTCGTCGAAAGCCGATGAATCGGATAGTTGGGTATCAAGCAAGAGCTTTACACCTTCTGAAGGACGGAGATCAGGCGGTTTTGACAGAGAGCGAAGAGGAGGATTTCCCACGAGCGGCGGTGGCGCCGATTCAGACAATTGGGGCAGAAAGCCTGATGGGGCTAGAGGTGGAATTGGTGAAAATGGTGGTAGCGCTGATTCAGAGAATTGGGGCAAAAGATCTGAAGGGGTTAGAAGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCAATCCCTTTGAACAATGGTAATCAGGAGGCTTCTGGTGTTGCAGTAAAGCCAAAGGGGTCTAATCCTTTTGGAAATGCAAGACCAAGGGAAGAGGTATTGGCTGAAAAGGGGCAGGATTGGAAGAAAATTGATGAGCAACTCGAATCGGTGAAAATTAAGGACACGGTTGAAAGGGCAGAGACATCTAGTGGAGCTTCGTTTGAAAGAAAAAAAGGCTTTGGAGCTCGAAGTGGTCGGTCTCCGGATTCGGGAAGGACTTGGAGGAAGCCGGAGTCTGTGGAGTCTCGTCCCCAAAGTGCTGAATTGGTTGAAGATGGACCTGCTGAGGAAAATTGA | 1218 | 51.31 | MAATVSPWGKPGAWALDAEEHEAELLKDQEEQSRHQEEPSADFPSLAAAAATKPKKKKGQSIPLSEFQTYGGPKPSAQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQNSLYDRGNRYSNSEDSPNSRRSSRVFDESRRTNDGSDREFRRESLPSRADEIDDWGAGKKPMVGNGFERRERGGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPTSGGGADSDNWGRKPDGARGGIGENGGSADSENWGKRSEGVRSGIGERPRLNLQPRSIPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWKKIDEQLESVKIKDTVERAETSSGASFERKKGFGARSGRSPDSGRTWRKPESVESRPQSAELVEDGPAEEN* | 406 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 13099403 | 13103036 | + | CsaV3_2G015760.1 | Csa02g01360 | 519417 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g01360 | 405 | Coils | Coil | 16 | 38 | - | - | |
Csa02g01360 | 405 | MobiDBLite | consensus disorder prediction | 62 | 83 | - | - | |
Csa02g01360 | 405 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 389 | IPR010433 | GO:0003743 | |
Csa02g01360 | 405 | Pfam | Plant specific eukaryotic initiation factor 4B | 7 | 379 | IPR010433 | GO:0003743 | |
Csa02g01360 | 405 | MobiDBLite | consensus disorder prediction | 366 | 389 | - | - | |
Csa02g01360 | 405 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 | 1 | 389 | - | - | |
Csa02g01360 | 405 | MobiDBLite | consensus disorder prediction | 323 | 352 | - | - | |
Csa02g01360 | 405 | MobiDBLite | consensus disorder prediction | 139 | 176 | - | - | |
Csa02g01360 | 405 | MobiDBLite | consensus disorder prediction | 120 | 138 | - | - | |
Csa02g01360 | 405 | MobiDBLite | consensus disorder prediction | 18 | 405 | - | - | |
Csa02g01360 | 405 | MobiDBLite | consensus disorder prediction | 18 | 38 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Csa02g01360 | Csa07g00084 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g01360 | Csa-Chr2:13099403 | Csa02g01779 | Csa-Chr2:17252709 | 1.69E-32 | dispersed | |
Csa02g01360 | Csa-Chr2:13099403 | Csa07g00084 | Csa-Chr7:796525 | 9.37E-127 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g01360 | - | - | csv:101214573 | 791.956 |