Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01375 ATGGGTTCTGTAAACTTGCCGCCGTCCATGACGGTGCTAAAATGGCTAGGATTTGTGTCCGCCGTATGGGTTCAGGCGATTTCTGGCAACAACTACACTTTCTCCAATTACTCGGACGCCTTGAAATCTCTCATGAATCTAACCCAACTTCAACTCAATAATCTGTCCGTGGCCAAAGATGTTGGGAAAGCGTTTGGACTTCTGGCCGGAATCGCTAGTGATAAGTTTCCGACTTGGGTGATTTTGCTTATTGGATCTGTTGAAGGTCTTGTTGGGTATGGCACTCAATGGCTTGTTGTTAGTCGAAGGATCTCTCCTCTTCCTTATTGGCAGATGTGCATCTTCTTGTGTATGGGTGGAAACAGCACGACATGGATGAACACGGCGGTGCTAGTAACATGCATCAGAAACTTCCGGAAGAATCGCGGCCCAGTTTCCGGCATTCTCAAAGGCTACGTCGGTCTCAGCACGGCCATTTTCACTGATCTCTGTTTTGCTTTGTTCTCCTCCGACCCATCTTCTTTCCTCCTCATGCTCTCCTTGGTCCCTCTCGCCGTCTGTCTCTTCGCCATGTTCTTCCTCCGCGAAATCCCAACTCAAACCACCATCACCGCCGCCGATACCCAACAAGAATCCAATTACTTTTCCGTCTTCAACGCTCTTGCTGTCGTCGTCGCCGTTTATCTCTTATGTTTCGACTTCGTCAAAAACTCCGGCAGACTCATCTCCCAATTATACTCAATTGGGCTTCTGATTCTCCTTGGATCCCCTTTGATTATCCCAATTTACTCATTTTTCAAGAGCTGGAACTCGATTCGGAGCCGGTTGGATCTGGAGGAGCCGCTAGTGAAAGAAGAAGTGGTAACAGGGGCGGTGAAGGAGGAAGCAGGGGAAACTGCTGTGATAGAACAGAGAGCGCCGGTGATTGGAGAAGAACATACGATATTTGAAGCGGTGAGAACGATTGACTTCTGGGTGTTGTTCGTGTCGTTTTTGTGTGGAGTTGGAACGGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTGGCTCTGGGTTACGCGGATGTATCCATGTTCGTTTCTCTCACAAGTATTTGGGGATTTTTTGGCCGGATTCTTTCCGGTACAATTTCCGAGCATTTTCTCAAGAAAGCAGGCACTCCAAGGCCTCTATGGAACGCAGCATCTCAAATTTTAATGACCGTTGGATACGTTTTGATGGCGATGGCGATGCCAGGGTCTCTCTACATCGGTTCAGTCATTGTCGGGATTTGCTACGGCGTTCGTCTCTCCGTCACTGTCCCCACTGCCTCTGAACTCTTCGGTCTCAAATACTACGGTCTCATCTACAACATTCTCATCCTCAACCTCCCGATCGGCTCCTTTCTATTCTCAGGCCTTCTCGCAGGGTTCCTCTATGACATGGAGGCGACTCCAACCGAGGGCGGCGGGAACACGTGCATCGGAGGACATTGCTATAGAATTGTGTTTCTTGTGATGGCATTGGCTTGTGTGATTGGGTTTGTTTTGGACATTTGGTTGGCGTTTAGAACCAAAGAGCTTTATTCCAAACTTAAAGCCAACAAGAAATCAAAAAAGGTAAACAGCAATAACTCTTAG 1623 48.12 MGSVNLPPSMTVLKWLGFVSAVWVQAISGNNYTFSNYSDALKSLMNLTQLQLNNLSVAKDVGKAFGLLAGIASDKFPTWVILLIGSVEGLVGYGTQWLVVSRRISPLPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCFALFSSDPSSFLLMLSLVPLAVCLFAMFFLREIPTQTTITAADTQQESNYFSVFNALAVVVAVYLLCFDFVKNSGRLISQLYSIGLLILLGSPLIIPIYSFFKSWNSIRSRLDLEEPLVKEEVVTGAVKEEAGETAVIEQRAPVIGEEHTIFEAVRTIDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSMFVSLTSIWGFFGRILSGTISEHFLKKAGTPRPLWNAASQILMTVGYVLMAMAMPGSLYIGSVIVGICYGVRLSVTVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFLVMALACVIGFVLDIWLAFRTKELYSKLKANKKSKKVNSNNS* 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13204393 13208544 - CsaV3_2G015910.1 Csa02g01375 519432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01375 540 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 538 - -
Csa02g01375 540 CDD MFS_Mch1p_like 13 508 - -
Csa02g01375 540 Gene3D MFS general substrate transporter like domains 10 211 IPR036259 -
Csa02g01375 540 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 10 538 - -
Csa02g01375 540 SUPERFAMILY MFS general substrate transporter 15 520 IPR036259 -
Csa02g01375 540 Pfam Nodulin-like 14 262 IPR010658 -
Csa02g01375 540 Gene3D MFS general substrate transporter like domains 321 539 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa02g01375 Csa07g00091 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01375 Csa-Chr2:13204393 Csa01g01332 Csa-Chr1:8623617 3.45E-103 dispersed
Csa01g02564 Csa-Chr1:22540657 Csa02g01375 Csa-Chr2:13204393 1.05E-80 transposed
Csa02g02588 Csa-Chr2:22567066 Csa02g01375 Csa-Chr2:13204393 1.06E-105 transposed
Csa04g00183 Csa-Chr4:1049693 Csa02g01375 Csa-Chr2:13204393 3.14E-111 transposed
Csa06g00642 Csa-Chr6:5355252 Csa02g01375 Csa-Chr2:13204393 2.94E-60 transposed
Csa02g01375 Csa-Chr2:13204393 Csa07g00091 Csa-Chr7:846941 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01375 - - csv:101216743 954.51