Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01383 ATGGCCGCTTTTCTCTCCACTTCCCTTTCCTCTTTCTTCTTCTCCTTCCTCCTTCTTCTCTCTACAGTTTCATCCCATTCCCCGTTGAAGACCTTCATCGTCCGCATCGACCGTTTCTCCAAACCCTCTGTTTTCCCCACTCATTACCACTGGTACACTTCCGAGTTCACCCAATCCCCCCAAATCCTCCATGTTTACGACACCGTCTTCCATGGATTCTCCGCAACTTTAACTCAAGACCAAGTAGATTCCATCGGAAAACACCCTTCTGTTCTTGCTGTTTTTGAGGACCGTCGTCGTCAACTTCACACCACTCGTTCCCCTCAGTTTCTCGGCCTTCGAAACCAGCGTGGTCTCTGGTCTGATTCCGATTACGGCTCCGATGTTATTATTGGAGTTTTCGATACCGGGATTTCCCCTGAACGACGAAGCTTCTCTGATGTGAATCTCGGTCCGATTCCACGTCGTTGGAAAGGGGTTTGTGAGACTGGAACTAAGTTCACGGCCAAAAACTGTAACAGGAAGATTGTGGGTGCGAGGTTTTTCTCTAAAGGTCATGAAGCAGGGGCCAACGCTGCTGGTCCGATTATTGGGATAAATGATACGATTGAGTATCGATCTCCGAGAGATGCTGATGGACATGGGACTCATACGGCATCGACGGCGGCTGGACGGCATTCGTTTCAGGCGAGTTTGGAGGGTTATGCTTCGGGGATTGCAAAGGGTGTGGCTCCTAAAGCGCGTTTAGCGGTTTATAAAGTTTGTTGGAAAAACTCTGGTTGTTTTGATTCTGATATTCTTGCGGCGTTTGATGCTGCGGTTAACGATGGTGTTGATGTCATTTCGATCTCAATTGGAGGCGGGGATGGGGTTTCCTCGCCGTATTATCTCGACCCAATTGCAATTGGATCGTACGGCGCCGCTTCTAAGGGTGTTTTCGTTTCGTCTTCGGCTGGAAACGATGGACCTAATGGAATGTCAGTGACGAACTTGGCACCCTGGGTTACGACGGTTGGAGCAGGTACGATTGACCGGAACTTCCCGTCGGTGGTGACTCTTGGAAACGGACGGAAGATTTATGGGGTTTCTCTCTACGCCGGAGCCCCGTTAAACGGTACAATGTATCCGTTGGTTTACCCTGGGAAATCAGGGGTTCTCTCTGTTTCGCTCTGTATGGAGAATTCGCTCGATCCTAAGGTTGTGACCGGAAAAATCGTGATCTGCGACAGGGGAAGTAGTCCCAGAGTGGCTAAGGGTTTAGTCGTGAAGAAGGCCGGTGGTGTCGGGATGATTCTAGCAAACGGAATCTCAAACGGCGAAGGACTCGTCGGTGATGCCCATCTTCTACCTGCCTGTGCCGTCGGCTCGGACGAAGGCGATGCCATGAAAGCCTACGCATCATCCTCTACAAATCCCACCGCCACCATCGCCTTCCAGGGGACCATAATCGGAATCAAACCTGCGCCGGTAGTGGCTTCGTTTTCAGCAAGAGGGCCAAATGGATTGAACCCAGAAATCCTAAAACCGGACATAATCGCACCAGGGGTTAACATTCTCGCCGCCTGGACAGACGCCGTCGGTCCAACCGGTTTGGACTTCGATAAACGAAAAACAGAGTTCAACATCTTGTCCGGTACATCAATGGCTTGTCCCCATGTAAGTGGAGCTGCCGCTCTGTTAAAATCAGCTCACCCAGATTGGAGTCCAGCAGCGTTAAGATCCGCCATGATGACCACCGCAAGTATCACCGACAACCGCCGCCAACCAATGACGGAAGAATCCACCGGAAAACCTTCAACTCCTTACGATTTCGGTGCCGGACATGTAAATTTAGGACTCGCAATGGACCCAGGTCTAATCTACGACATTACAAACACCGATTACATAAACTTCTTGTGCTCAATCGGGTACGGCCCGAAAATGATCCAAGTCATAACAAGAACACCGGTTAGATGTCCGACGAAAAAACCATTACCGGAAAATCTGAATTACCCATCAATCGTAACAGTATTTTCAAGTCTATCAAAAGGGTGGTCGACAAAGTCGTTTATACGAACGGCGACTAACGTGGGGCCATCAAATTCAGTGTACAGAGTTAAAATCGAAGCTCCAAAAGGAGTGACAGTGAAGGTGAAACCATCAAAACTGGTGTTTTCAACGACGGTGAAGAAACAGAGCTTCGTTGTGGCAATTTCAGCCGACAATCAGAATCTTGCACTGGGGGATGTGGGGGCTGTTTTTGGTTGGCTTTCTTGGTCCGATGGAAAGCATGTGGTCCGTAGTCCATTGGTAGTGACTCAATTAGAGCCCTTGTAA 2316 49.53 MAAFLSTSLSSFFFSFLLLLSTVSSHSPLKTFIVRIDRFSKPSVFPTHYHWYTSEFTQSPQILHVYDTVFHGFSATLTQDQVDSIGKHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIGVFDTGISPERRSFSDVNLGPIPRRWKGVCETGTKFTAKNCNRKIVGARFFSKGHEAGANAAGPIIGINDTIEYRSPRDADGHGTHTASTAAGRHSFQASLEGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGVSSPYYLDPIAIGSYGAASKGVFVSSSAGNDGPNGMSVTNLAPWVTTVGAGTIDRNFPSVVTLGNGRKIYGVSLYAGAPLNGTMYPLVYPGKSGVLSVSLCMENSLDPKVVTGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGSDEGDAMKAYASSSTNPTATIAFQGTIIGIKPAPVVASFSARGPNGLNPEILKPDIIAPGVNILAAWTDAVGPTGLDFDKRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTTASITDNRRQPMTEESTGKPSTPYDFGAGHVNLGLAMDPGLIYDITNTDYINFLCSIGYGPKMIQVITRTPVRCPTKKPLPENLNYPSIVTVFSSLSKGWSTKSFIRTATNVGPSNSVYRVKIEAPKGVTVKVKPSKLVFSTTVKKQSFVVAISADNQNLALGDVGAVFGWLSWSDGKHVVRSPLVVTQLEPL* 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13262617 13265888 + CsaV3_2G015990.1 Csa02g01383 519440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01383 771 SUPERFAMILY Subtilisin-like 102 619 IPR036852 GO:0004252|GO:0006508
Csa02g01383 771 SUPERFAMILY Protease propeptides/inhibitors 31 99 - -
Csa02g01383 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 765 IPR045051 -
Csa02g01383 771 Gene3D - 632 768 - -
Csa02g01383 771 CDD PA_subtilisin_like 350 476 - -
Csa02g01383 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 103 IPR037045 -
Csa02g01383 771 Gene3D Peptidase S8/S53 domain 128 628 IPR036852 GO:0004252|GO:0006508
Csa02g01383 771 Pfam Fibronectin type-III domain 661 765 IPR041469 -
Csa02g01383 771 CDD Peptidases_S8_3 101 581 IPR034197 -
Csa02g01383 771 Gene3D - 344 483 - -
Csa02g01383 771 SUPERFAMILY PA domain 393 469 IPR046450 -
Csa02g01383 771 Pfam Peptidase inhibitor I9 31 103 IPR010259 -
Csa02g01383 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Csa02g01383 771 Pfam PA domain 375 461 IPR003137 -
Csa02g01383 771 ProSiteProfiles Serine proteases, subtilase domain profile. 101 615 - -
Csa02g01383 771 Pfam Subtilase family 126 593 IPR000209 GO:0006508|GO:0008236
Csa02g01383 771 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 20 765 - -
Csa02g01383 771 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Csa02g01383 771 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Csa02g01383 771 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01383 Csa-Chr2:13262617 Csa07g02314 Csa-Chr7:21479271 0 dispersed
Csa07g00232 Csa-Chr7:1828536 Csa02g01383 Csa-Chr2:13262617 0 dispersed
Csa02g01383 Csa-Chr2:13262617 Csa06g02998 Csa-Chr6:25857587 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01383 - - csv:101217844 1485.32