Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01390 ATGGATATAAAAACCAAACAACGAGATTACGAACAACAAGACGCGGAAGCTATGGGCACTGAAGAAGACGATCTCGATCTTCTCCTTTCTCTCCAAGATAAAGTCCTTGAAACTCCTCCTGGAACTCCGCCTCATACCTCAGACCTTCTATCTGACGATGAATCACCAAGACGAGCAGGTCCGGCGGATATGTCTATCTTTAGAAACGCTGTCAAAGACTGCCTTGATTATGACCACATACCGACTGAAAAAAATGGAAAAACGAACCGGTCTAAGGCCTCTAATGATGTTTCAATCGAGAAGTTTTCTGGTTTGCGAATGAGGAATCAAGTTGTAGCACCTGCAGAGCTTCGTGATCGTTTTTCTGATATTCGCTTTGTTCGTTTGTCAACCATAAAGAATATGTTGATCGGGGACACCCTTTCAGGCTGTTGGGTAACTGTCGGAGTGTTGACTGAGAAAGGAAGTCCAAAGACAAGCTCTACTGGGAAAGCTTACTGCATCTGGAAACTTAGTTGTTTGGATGAAAACACTGTTTCTGTTTTCTTATTTGGTGACGCTTATAAAAGAAATTGCAAGGAGCTGGCTGGAACAGTTTTTGCCCTTTTTAACTCTACAGTACGAAAGGATGCAACGGGCATGGGATTTTCTTTAAGTGTTTATCAACCAAACCAGTTGTTAATGATGGGCACTTCAGATGACTATGGAGTATGCAAGGGGAAGAAGGATGGGATTGCTTGTACAGCAGTAATAAATAGGCGACGTGGTATATACTGTAAATACCACAAATCAAAGGCATCAGAAAAATATTCCACAACCACACGAACTGAGCTCAAAGGAGGGAATCTGAGGACTGCATTCAGAGATTATCATCATAAGCCAGAGGGAGTTTACATGGTAGATCCGCTAGCTGGTAAAGTGACTTCTAAGAAGCCAACACAGCCGATTAAACTGTTGTCTGTGGAAGGCCTGAAAAGGGCATTGAGCAATGCAGATAAAGTAACCACCAACGCACACTCGCAAGGGAAAAGATTCCTCGCTGAGATAACAGGGAAATTGACTAGCCAAAGTGTAAATAAAGAATCAACCAAAAGAAGTCAGCAGAGAATCAATTCAGAAAAGACATCAATTTTGAAGTCGACAGTTGAAAACCAACAACCAGACCCAAAAAGAAAGAAAACTGACCATACTCCGGCAAACAAAACCACTAAAGATATCGGGAAGATGATAGAGTTAGATTATGTTAGCTCAGAAGATGACGATGATGATATCAACCTTATATTCGGCAGATAA 1293 41.69 MDIKTKQRDYEQQDAEAMGTEEDDLDLLLSLQDKVLETPPGTPPHTSDLLSDDESPRRAGPADMSIFRNAVKDCLDYDHIPTEKNGKTNRSKASNDVSIEKFSGLRMRNQVVAPAELRDRFSDIRFVRLSTIKNMLIGDTLSGCWVTVGVLTEKGSPKTSSTGKAYCIWKLSCLDENTVSVFLFGDAYKRNCKELAGTVFALFNSTVRKDATGMGFSLSVYQPNQLLMMGTSDDYGVCKGKKDGIACTAVINRRRGIYCKYHKSKASEKYSTTTRTELKGGNLRTAFRDYHHKPEGVYMVDPLAGKVTSKKPTQPIKLLSVEGLKRALSNADKVTTNAHSQGKRFLAEITGKLTSQSVNKESTKRSQQRINSEKTSILKSTVENQQPDPKRKKTDHTPANKTTKDIGKMIELDYVSSEDDDDDINLIFGR* 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13318878 13324071 + CsaV3_2G016060.1 Csa02g01390 519447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01390 430 MobiDBLite consensus disorder prediction 385 408 - -
Csa02g01390 430 MobiDBLite consensus disorder prediction 357 384 - -
Csa02g01390 430 Pfam Primase zinc finger 230 271 IPR015408 GO:0005634|GO:0006260
Csa02g01390 430 MobiDBLite consensus disorder prediction 1 15 - -
Csa02g01390 430 MobiDBLite consensus disorder prediction 357 408 - -
Csa02g01390 430 Gene3D - 90 263 IPR012340 -
Csa02g01390 430 PANTHER PROTEIN MCM10 HOMOLOG 87 391 IPR040184 GO:0003690|GO:0003697|GO:0006270
Csa02g01390 430 MobiDBLite consensus disorder prediction 1 61 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01390 K10736 - csv:101219022 845.884