Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g01394 | ATGGAAGATGGGGAGCTTGAATCCTCGAACCCGGAAGTGTTTTCGAGTTCGAATGCCATTGAGCTTCCGAGTAGTTGCTCAATGGATAGCTTCTTTGATGAAATTCTGAAGGATACTCATGCTTGTACACATGCTCATACTTGCAACCCTCCTGGCCCTGATTATTCACATACACATACCTGTTTTCATGTTCATACGAAAATTGTTTCTTCCCCCACCGAAGAAAAGGTTTCCACTGATGATACAGCGGATTCTGTAGATAAAAAGAATAAGAAGCGCCCATTAGGTAATCGTGAAGCAGTTCGTAAATACCGGGAGAAGAAAAAGGCAAGAGCTGCCTCATTGGAAGATGAAGTTGTGAGATTGAGAGCCCTGAATCAGCAACTGTTGAAGAGGTTGCAAGGTCAGGCTGCATTGGAGGCTGAGATTTCTAGGCTCAAATGTTTGCTTGTGGATATTCGGGGAAGAATTGAAGGGGAGATTGGAAACTTTCCATATCAGAAACCAACCAATTCAAATCCGCCCAATCAGAATGTGTCTGGTAGTTACATGATAAATCCATGTAATGTGGAATGCAATGATCAGGCATATTGCCTTCATCCAGGGGATGATGGAAAAAGTGGAGAGAGCGCTTTGTTGAATGGGCAAAGTTTTAGTGCATGTGACTTTGAAAATCTTCAGTGCTTGGCAAATCAAAACACGGGAGCAAAGGAACCTCCTGACTGTGGACTGGGAAACACAATTGCTAACGTTAATTGTGCAGAACTAAATCCGAAGAAAGGTGTATATGAAAGACTCTATCCAAGTTATGTCTTATAA | 819 | 42.37 | MEDGELESSNPEVFSSSNAIELPSSCSMDSFFDEILKDTHACTHAHTCNPPGPDYSHTHTCFHVHTKIVSSPTEEKVSTDDTADSVDKKNKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGNFPYQKPTNSNPPNQNVSGSYMINPCNVECNDQAYCLHPGDDGKSGESALLNGQSFSACDFENLQCLANQNTGAKEPPDCGLGNTIANVNCAELNPKKGVYERLYPSYVL* | 273 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 13341061 | 13344993 | + | CsaV3_2G016100.1 | Csa02g01394 | 519451 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g01394 | 272 | Coils | Coil | 98 | 132 | - | - | |
Csa02g01394 | 272 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 87 | 134 | IPR004827 | GO:0003700|GO:0006355 | |
Csa02g01394 | 272 | Gene3D | - | 75 | 153 | - | - | |
Csa02g01394 | 272 | SUPERFAMILY | Leucine zipper domain | 89 | 135 | IPR046347 | GO:0003700|GO:0006355 | |
Csa02g01394 | 272 | SMART | brlzneu | 85 | 152 | IPR004827 | GO:0003700|GO:0006355 | |
Csa02g01394 | 272 | MobiDBLite | consensus disorder prediction | 77 | 96 | - | - | |
Csa02g01394 | 272 | Pfam | Basic region leucine zipper | 87 | 142 | IPR004827 | GO:0003700|GO:0006355 | |
Csa02g01394 | 272 | MobiDBLite | consensus disorder prediction | 72 | 96 | - | - | |
Csa02g01394 | 272 | PANTHER | CCAAT/ENHANCER BINDING PROTEIN | 1 | 240 | - | - | |
Csa02g01394 | 272 | CDD | bZIP | 91 | 144 | - | - | |
Csa02g01394 | 272 | PANTHER | BASIC LEUCINE ZIPPER 23 | 1 | 240 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Csa02g01394 | Csa07g00098 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g01394 | Csa-Chr2:13341061 | Csa07g00098 | Csa-Chr7:903274 | 1.64E-135 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30931 | PF07716 | bZIP_2 | 4.90E-15 | CL0018 | Csa | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g01394 | K25785 | - | csv:101219501 | 531.946 |