Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01394 ATGGAAGATGGGGAGCTTGAATCCTCGAACCCGGAAGTGTTTTCGAGTTCGAATGCCATTGAGCTTCCGAGTAGTTGCTCAATGGATAGCTTCTTTGATGAAATTCTGAAGGATACTCATGCTTGTACACATGCTCATACTTGCAACCCTCCTGGCCCTGATTATTCACATACACATACCTGTTTTCATGTTCATACGAAAATTGTTTCTTCCCCCACCGAAGAAAAGGTTTCCACTGATGATACAGCGGATTCTGTAGATAAAAAGAATAAGAAGCGCCCATTAGGTAATCGTGAAGCAGTTCGTAAATACCGGGAGAAGAAAAAGGCAAGAGCTGCCTCATTGGAAGATGAAGTTGTGAGATTGAGAGCCCTGAATCAGCAACTGTTGAAGAGGTTGCAAGGTCAGGCTGCATTGGAGGCTGAGATTTCTAGGCTCAAATGTTTGCTTGTGGATATTCGGGGAAGAATTGAAGGGGAGATTGGAAACTTTCCATATCAGAAACCAACCAATTCAAATCCGCCCAATCAGAATGTGTCTGGTAGTTACATGATAAATCCATGTAATGTGGAATGCAATGATCAGGCATATTGCCTTCATCCAGGGGATGATGGAAAAAGTGGAGAGAGCGCTTTGTTGAATGGGCAAAGTTTTAGTGCATGTGACTTTGAAAATCTTCAGTGCTTGGCAAATCAAAACACGGGAGCAAAGGAACCTCCTGACTGTGGACTGGGAAACACAATTGCTAACGTTAATTGTGCAGAACTAAATCCGAAGAAAGGTGTATATGAAAGACTCTATCCAAGTTATGTCTTATAA 819 42.37 MEDGELESSNPEVFSSSNAIELPSSCSMDSFFDEILKDTHACTHAHTCNPPGPDYSHTHTCFHVHTKIVSSPTEEKVSTDDTADSVDKKNKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGNFPYQKPTNSNPPNQNVSGSYMINPCNVECNDQAYCLHPGDDGKSGESALLNGQSFSACDFENLQCLANQNTGAKEPPDCGLGNTIANVNCAELNPKKGVYERLYPSYVL* 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13341061 13344993 + CsaV3_2G016100.1 Csa02g01394 519451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01394 272 Coils Coil 98 132 - -
Csa02g01394 272 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Csa02g01394 272 Gene3D - 75 153 - -
Csa02g01394 272 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Csa02g01394 272 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Csa02g01394 272 MobiDBLite consensus disorder prediction 77 96 - -
Csa02g01394 272 Pfam Basic region leucine zipper 87 142 IPR004827 GO:0003700|GO:0006355
Csa02g01394 272 MobiDBLite consensus disorder prediction 72 96 - -
Csa02g01394 272 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 240 - -
Csa02g01394 272 CDD bZIP 91 144 - -
Csa02g01394 272 PANTHER BASIC LEUCINE ZIPPER 23 1 240 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa02g01394 Csa07g00098 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01394 Csa-Chr2:13341061 Csa07g00098 Csa-Chr7:903274 1.64E-135 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30931 PF07716 bZIP_2 4.90E-15 CL0018 Csa TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01394 K25785 - csv:101219501 531.946