Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01414 ATGAGAGGGATTGGTAGAATGGTAAGCTCTTTTGTGGGTTTTGTTCTTGTTTTGACAACTTTGTTGGCGGTTGTTCCCACGACCGAGGCGCAGCTCCGACGAGATTTCTATGCCGATGTATGCCCTAACGTCGAGAGTATAGTTCGAAGCGCTGTGACAAAGAAGTTCAAACAAACGTTTGTTACTGTTCCTGCTACTCTTCGCCTCTTCTTCCATGACTGCTTTGTTCAGGGATGTGATGCGTCAGTGATGATCGCTTCAGATGGAAGCAACAAGGCAGAGAAGGATCATCCTGATAATCTTTCGTTAGCCGGTGATGGATTCGATACCGTTATCAAAGCTAAAGCAGCAGTTGATGCTGTACCAGGATGTAAAAACAAAGTCTCATGTGCTGATATTCTCGTCATGGCTACTCGAGATGTCATTTCATTGGCGAGAGGACCTTCATATGCAGTGGAGTTGGGAAGAAAAGATGGGCTCGTTTCCAGGGCTTCAGATGTTGAAGGAAAATTGCCTCAACCATCCTTCAATCTCAATCAACTTAATGCTATGTTTGCTGCCAATGGTCTTTCTCAAGCTGACATGATTGCTCTCTCTGCGGCACACACGGTAGGATTCTCCCATTGCAGTAAGTTTGCAAACAGAATCTACAATTTCAGTCGTACAAATCCAGTTGATCCAACGATAAATCCGACGTATGCAAAAAAGCTTCAAGATATGTGTCCCCAAGATGTGGATCCAAGGATAGCCATTGACATGGATCCCAACACCCCCAGAAGGTTTGATAATATGTACTTCAAAAATCTTCAACAAGGAATGGGCCTTTTCACTTCTGACCAAATCCTCTTCACTGACCGAAGGTCTAAGTCCACTGTCAACATTTGGGCACATAGTGGTAGAACCTTCTACACAGCCTTTATTGATGCCATGACCAAGTTGGGTCGAGTCGGTGTTAAGACCGGATCCGATGGTAACATTCGTACTGATTGTGGTGTTTTCAACTCTTGA 1008 44.54 MRGIGRMVSSFVGFVLVLTTLLAVVPTTEAQLRRDFYADVCPNVESIVRSAVTKKFKQTFVTVPATLRLFFHDCFVQGCDASVMIASDGSNKAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPGCKNKVSCADILVMATRDVISLARGPSYAVELGRKDGLVSRASDVEGKLPQPSFNLNQLNAMFAANGLSQADMIALSAAHTVGFSHCSKFANRIYNFSRTNPVDPTINPTYAKKLQDMCPQDVDPRIAIDMDPNTPRRFDNMYFKNLQQGMGLFTSDQILFTDRRSKSTVNIWAHSGRTFYTAFIDAMTKLGRVGVKTGSDGNIRTDCGVFNS* 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13518309 13520732 + CsaV3_2G016300.1 Csa02g01414 519471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01414 335 ProSiteProfiles Plant heme peroxidase family profile. 31 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 Gene3D - 35 334 - -
Csa02g01414 335 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 Gene3D Peroxidase, domain 2 172 313 - -
Csa02g01414 335 CDD secretory_peroxidase 31 333 IPR033905 GO:0004601|GO:0042744
Csa02g01414 335 Pfam Peroxidase 48 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Csa02g01414 335 SUPERFAMILY Heme-dependent peroxidases 31 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa02g01414 335 PANTHER PEROXIDASE 15 334 - -
Csa02g01414 335 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Csa02g01414 335 PANTHER - 15 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01414 Csa-Chr2:13518309 Csa02g02592 Csa-Chr2:22580320 3.42E-148 dispersed
Csa03g04402 Csa-Chr3:38393105 Csa02g01414 Csa-Chr2:13518309 2.52E-152 transposed
Csa02g01414 Csa-Chr2:13518309 Csa06g03007 Csa-Chr6:25927418 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01414 K00430 - csv:101208254 654.825