Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01568 ATGGAGTCTTGTTTACTTAAACCAAAAGACACCACTTCTTGGTGGGTTCTGGCTCTACCTTATTTCCTTGGCCTTGAAAACTATGCCCTCTTTCACTCCTTCCTCCTCATTCTCCTCGCTTTCTTCTCTCTCGCTCTTCTCACCTGGGTTTTTTCACCAGGTGGTACTGCTTGGAGAAATGGAAGAAACCGTCGGGGCCTACTCCCTATACCTGGCCCTCGTGGCCTTCCATTTCTTGGCAGTTTGTTCACTCTCACTCATTCCTTACCTCATCGCACTCTTGCTGCCTTAGCATCGACCCGTTGCGAATCTAATCTTATGGCTTTCTCTCTCGGCTCCACTCCTGTTGTCGTCGCATCCGACCCTAACACCGCTAAGGAAATCTTAACCTCCCCACACTTCGCGGACCGCCCGCTTAAGCAGTCCGCGAAGAGTCTAATGTTCGGTCGAGCCATAGGGTTCGCACCGAACGGAACGTACTGGCGTATGTTAAGAAGAATTGCGTCTTCCCACCTTTTCTCTCCAAAGCGTATTGCCGCTCACGAGAGCGCTCGTCAGCGGCAATGCGCGGAAATGATTCGCAACATTCACCACGAACAAATAGTCCATGGAAGTGTGGGGTTGAGGAAGCATGTTCAAGTGGCTTCATTGAAGAACGTGATGTGGAGTGTGTTTGGGAAAAGGTTGGAGGAAGGGGATATGGAATTGGAAATGGTTCGCGATTTGGTTCGTGAAGGGTTTGAGCTATTGGGTGCGTTTAATTGGTCGGATTATATGCCATGGCTGAGTTGGTTTTATGATCCGTTTCGTATTAACCAACGGTGCGCTAAACTTGTTCCTAAGGTTAATGAGTTTGTTGGTGGCGTAATTGATGAACACCGCCGTTGTAAAACCTTGTCCGATGATTCTGATTTTGTTGACGTTTTGCTTTCTCTTGATGGTGATGAAAAACTCAAGGATGATGACATGATCGCTGTTTTATGGGAAATGATATTTAGGGGTACGGATACGACAGCGCTACTAACGGAATGGGTGATGGCGGAGTTAGTTTTACACGGCGAAATACAAGAAGAAGTTAGGAAGGAATTGGAAAGAGTAGTCGGGGGTGGTGAGGAAAGCAACATCACGGACGCTGAGGTGGCGAAACTACCATACTTACAGGCGGTGGTGAAGGAAACTCTACGGCTACACCCACCGGGTCCACTGCTATCGTGGGCCCGTCTCTCTTCGTCGGATGTCCAGCTCAGCAACGGCATGCTTATCCCTCAGAACACAACCGCCATGGTCAATATGTGGGCCATCACCCACGATCCCCACGTATGGGAACAACCACACGTGTTCAACCCCGCCAGGTTCCTCAATGCCGACGTGGACATCCGTGGCAGCGACCTCCGCCTTGCCCCTTTCGGGGCAGGCCGGAGGGCCTGCCCGGGTAAAAACCTCGGCCTTGTCACCGTCACTTTATGGGTCGCTAAGTTGGTTCATCACTTTAAATGGGCCCCCGACCCGGCCCACCCCGTGGATCTAACCGAACTTCTTAAGCTCTCTTCTGAGATGAAGAATCCTCTGCGTGCAGTCGTAGGGGAAATACGTGCTCTTTAG 1602 50.69 MESCLLKPKDTTSWWVLALPYFLGLENYALFHSFLLILLAFFSLALLTWVFSPGGTAWRNGRNRRGLLPIPGPRGLPFLGSLFTLTHSLPHRTLAALASTRCESNLMAFSLGSTPVVVASDPNTAKEILTSPHFADRPLKQSAKSLMFGRAIGFAPNGTYWRMLRRIASSHLFSPKRIAAHESARQRQCAEMIRNIHHEQIVHGSVGLRKHVQVASLKNVMWSVFGKRLEEGDMELEMVRDLVREGFELLGAFNWSDYMPWLSWFYDPFRINQRCAKLVPKVNEFVGGVIDEHRRCKTLSDDSDFVDVLLSLDGDEKLKDDDMIAVLWEMIFRGTDTTALLTEWVMAELVLHGEIQEEVRKELERVVGGGEESNITDAEVAKLPYLQAVVKETLRLHPPGPLLSWARLSSSDVQLSNGMLIPQNTTAMVNMWAITHDPHVWEQPHVFNPARFLNADVDIRGSDLRLAPFGAGRRACPGKNLGLVTVTLWVAKLVHHFKWAPDPAHPVDLTELLKLSSEMKNPLRAVVGEIRAL* 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14836015 14838440 + CsaV3_2G017840.1 Csa02g01568 519625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01568 533 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PANTHER CYTOCHROME P450 FAMILY 78 PROTEIN 11 527 - -
Csa02g01568 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Csa02g01568 533 Gene3D Cytochrome P450 60 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 SUPERFAMILY Cytochrome P450 70 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 Pfam Cytochrome P450 71 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01568 533 PANTHER CYTOCHROME P450 78A7-RELATED 11 527 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01568 Csa-Chr2:14836015 Csa06g02088 Csa-Chr6:18629600 1.60E-168 dispersed
Csa02g01568 Csa-Chr2:14836015 Csa01g00614 Csa-Chr1:3922185 1.66E-170 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01568 K20619 - csv:101214099 1037.33