Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01585 ATGGCAAAATCATCACCAGAAGACGAACATCCAATCAAGACTCTCGCATGGGGTGCTCGAGATTCATCTGGCTTAATCTCTCCTTTCCCTTTATCTCGAAGGGAAAATCGTGATGAAGATGTCAATATCAAAATCCTTTACTGTGGTGTTTGCCATTCTGATCTACATGCAGCCAAGAATGAATGGGGTTTCACAAGTTATCCAGTTGTCCCAGGGCATGAGATTGTTGGTGTTGTGACCTCTGTTGGGAATAATGTTAAGAAATTCAAAGCAGGCGACCAAGTCGGGGTTGGTGTCATAGTTGAATCTTGCAAAAGTTGTGAAAATTGTGAAGAGGACAGGGAGAATTACTGCCCCAAATTGGTATATACTTACAATGCACATTTACATGATGGATCAAAGACTTATGGTGGATATTCTGATAAGATTGTCGTCGATCAGCGTTACGTGCTTCGAATTCCTGAAAATTTACCCCTCGATGGTACAGCTCCACTCCTATGTGCTGGAATCACAGTTTATAGCCCCATGAAATATTATGGAATGAATGAAAAAGGTAAGCATTTGGGTGTGGTTGGTCTTGGTGGGCTTGGTCATGTTGCTGTTAAGATTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATAAGTACCTCTCCAAAAAAGAAGGCGGAAGCTATTAGCAAGCTTGGTGCCGATTCTTTCCTCGTTTCAACTGATCCCGAACAAATGAAGGCTGCAGCAGAGACAATGGATTACATTATGGACACGGTATCTGCTGTTCATGCTCTCGCTCCATTGCTTAGTCTTCTAAAGCTGAATGGAAAGTTGATCACTGTGGGTTTACCTAACAAGCCCCTAGAGCTGCCAATTTCTTCTCTAGTTGTCGCTAGGAGGATGGTTGGTGGAAGCAACTTTGGAGGGCTGAAAGAGACACAAGAGATGTTGGATTTCTGTGCTGAGCACAACATTGCTGCAGACGTTGAGGTCATTAAGATGGATGACATAAACAATGCCATGGAAAGACTTGCCAAATCCGATGTTCAATACCGGTTCGTGATCGACATTGCAAACTCCTTGAAATAA 1080 42.96 MAKSSPEDEHPIKTLAWGARDSSGLISPFPLSRRENRDEDVNIKILYCGVCHSDLHAAKNEWGFTSYPVVPGHEIVGVVTSVGNNVKKFKAGDQVGVGVIVESCKSCENCEEDRENYCPKLVYTYNAHLHDGSKTYGGYSDKIVVDQRYVLRIPENLPLDGTAPLLCAGITVYSPMKYYGMNEKGKHLGVVGLGGLGHVAVKIGKAFGLKVTVISTSPKKKAEAISKLGADSFLVSTDPEQMKAAAETMDYIMDTVSAVHALAPLLSLLKLNGKLITVGLPNKPLELPISSLVVARRMVGGSNFGGLKETQEMLDFCAEHNIAADVEVIKMDDINNAMERLAKSDVQYRFVIDIANSLK* 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14980394 14984004 - CsaV3_2G018010.1 Csa02g01585 519642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01585 359 Coils Coil 351 359 - -
Csa02g01585 359 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
Csa02g01585 359 Pfam Alcohol dehydrogenase GroES-like domain 39 152 IPR013154 -
Csa02g01585 359 CDD CAD1 16 353 - -
Csa02g01585 359 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 13 358 - -
Csa02g01585 359 PANTHER ALDEHYDE REDUCTASE 13 358 - -
Csa02g01585 359 Gene3D - 17 354 - -
Csa02g01585 359 SUPERFAMILY GroES-like 10 200 IPR011032 -
Csa02g01585 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 322 IPR036291 -
Csa02g01585 359 SMART PKS_ER_names_mod 18 352 IPR020843 GO:0016491
Csa02g01585 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Csa02g01585 359 Gene3D - 168 324 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01585 Csa-Chr2:14980394 Csa06g03097 Csa-Chr6:26534763 1.32E-167 dispersed
Csa02g01585 Csa-Chr2:14980394 Csa02g01586 Csa-Chr2:14999476 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01585 K00083 - csv:101206562 684.485