Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01586 ATGGCGAAATCATCAGGAAATGAACTTACACACAAGACTTTTGGTTGGGCTGCTCGAGATTCATCTGGGTTACTATCTCCTTTTCATTTCTCTCGAAGGGAAAATGGTGATGATGATGTCTCTATCAAAGTTCTTTACTGTGGGGTTTGCCACTCTGATCTGCATATGCTCAAGAATGACTGGGGTTCCACAGATTATCCAGTAGTACCTGGGCATGAGATTGTGGGTGTTGTGACTTCTGTTGGAAAAAATGTGAAGAAATTCAAAGCAGGAGACGAAGTCGGTGTCGGTGTCATAGTTGGATCTTGTAGAAGTTGTGAAAATTGTAAACAAGACTTGGAGAGTTACTGTCCCAAGATGGAATATACTTACAATTCTCCTGGAGTTGATGGAACAAAGAATTACGGTGGCTATTCCGATAAGATCGTTGTCGATCAACATTTTGTTGTTAGATTTCCTAAAAACTTAGCTCTTGATGCTGGGGCTCCACTCCTATGTGCTGGGATTACAGTCTATAGCCCAATGAAACATTTTGGAATGACTGAACCTGGTAAGCATTTGGGTGTGGCTGGACTTGGTGGGCTTGGTCATGTTGCTGTCAAGTTTGGAAAGGCTTTTGGATTGAAAGTTACTGTCATTAGTACCTCTTCTAGGAAGAAGGAAGAAGCAATTGACAGGCTCGGTGCTGACGCTTTCGTTGTTTCTAGTGATCCCGAACAATTGAAGGCTGCCATGGGAACTATGGATTACATTTTGGACACAATATCTGCTGTTCATCCTCTTGATCCGTTGATTAGACTGCTAAACCTCAATGGAAAATTGGTTGCTGTCGGCTTACCTAACAAGCCAGTTGAACTATCAATCGGGATTCTCGCTTCTGGTAGGAGGGTGGTAGCTGGAAGCAACTTTGGAGGGCTGAAAGAGACACAAGAAATGTTAGATTTCTGTGGAAAACACAATATTACAGCCGAAATTGAGCTCATTAAGATGAATGACATTAACTCAGCCATGGAAAGGCTTGCAAAAGCTGATGTTAAATATCGGTTTGTGATCGACATTGAAAACTCTTTCAAATAG 1077 41.97 MAKSSGNELTHKTFGWAARDSSGLLSPFHFSRRENGDDDVSIKVLYCGVCHSDLHMLKNDWGSTDYPVVPGHEIVGVVTSVGKNVKKFKAGDEVGVGVIVGSCRSCENCKQDLESYCPKMEYTYNSPGVDGTKNYGGYSDKIVVDQHFVVRFPKNLALDAGAPLLCAGITVYSPMKHFGMTEPGKHLGVAGLGGLGHVAVKFGKAFGLKVTVISTSSRKKEEAIDRLGADAFVVSSDPEQLKAAMGTMDYILDTISAVHPLDPLIRLLNLNGKLVAVGLPNKPVELSIGILASGRRVVAGSNFGGLKETQEMLDFCGKHNITAEIELIKMNDINSAMERLAKADVKYRFVIDIENSFK* 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14999476 15002165 - CsaV3_2G018020.1 Csa02g01586 519643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01586 358 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Csa02g01586 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 321 IPR036291 -
Csa02g01586 358 Gene3D - 167 323 - -
Csa02g01586 358 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Csa02g01586 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Csa02g01586 358 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 11 357 - -
Csa02g01586 358 PANTHER ALDEHYDE REDUCTASE 11 357 - -
Csa02g01586 358 CDD CAD1 14 352 - -
Csa02g01586 358 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Csa02g01586 358 SUPERFAMILY GroES-like 20 185 IPR011032 -
Csa02g01586 358 Gene3D - 16 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01586 Csa-Chr2:14999476 Csa06g03097 Csa-Chr6:26534763 2.39E-173 dispersed
Csa02g01585 Csa-Chr2:14980394 Csa02g01586 Csa-Chr2:14999476 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01586 K00083 - csv:101205228 708.753