Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g01587 | ATGATCATTATGAAATATATGAAGATGGATGAGCATAGAATAGCTTTCATGGCTGTGATTTTAATTCAAGCCATTTACGCTGGTATGTTTCTCGTCTCCAAGGCGGCTTTCGACGTTGGAATGAACAGCTATGTCTTCGTTTTCTATCGTCAAGCCTTCGCTACTGTCTTCCTTTCTCCAATAGCCTTCTTTTTTCAATGGAAAGATGCCCCACCCTTGACATTCTTCACCTTCTGCAAGATTTTTATGCTCTCTTTATTTGGGATAGCCCTATGTTTAAATCTTTATGGGATTGCTCTAGTGTACACATCAGCAACATTGGCTGCAGCAACTACAAATTCTCTTCCTGTCACCACCTTCTTTGTTGCCCTCTTACTTAGGATGGAGGTATTGAGGTTGAAGTCAATAGCAGGAATTGGAAAGTTAGCAGGAATATTATTTTGCATTGGTGGTGTTGGAGTTTTGGCATTTTACAAAGGGCCCCAGTTGAATTTTTTCAACCATCATCATCTCTTTTCCGTCCATAACCCTAATCACCATTCTTCTTCGGTTGCATTACCCAATACTTGGTTGAAGGGTTGCTTTTTGATGCTATCTGCCAATACCTTATGGGGTATTTGGATTGTTCTTCAGGCCTTTGTATTGAAAAGCTATCCTTCAAAGCTTATGTTGACAAATCTTCAGTGTTTATTAAGTTCATTTCAATCCTTTGCTATTGCTATTGCAATGGAAAGAGACCCTCAGCAATGGAAACTTGGCTGGAATCTTAGGCTTCTCTCAGTGGCATATTGTGGAATCGTGGTGACCGCGGTTACCTACTGTCTTCAAGCTTGGGTTATTGAGAAGAAAGGACCAGTTTATCTAGCCATGTCTACACCTATTGCTCTTGTCATTACAATCTTCTTCTCTGCTGTTTTTCTTGGAGAGAGTATCAGTCTTGGAAGTATCTTAGGAGGATTGTTATTGGTGGGAGGGTTGTATTTTGTGCTATGGGGAAAGAGCAAAGAGCAAAAAATAAGTGAAGGATTGAAAGAAGGTACCAAAGAATGCGACGACATGGAAGAAGGGAAAGATAGCACTAAACTACCCAATGAAAATCCAACATCTTCTGTGGAAAATGTTTGA | 1125 | 40.09 | MIIMKYMKMDEHRIAFMAVILIQAIYAGMFLVSKAAFDVGMNSYVFVFYRQAFATVFLSPIAFFFQWKDAPPLTFFTFCKIFMLSLFGIALCLNLYGIALVYTSATLAAATTNSLPVTTFFVALLLRMEVLRLKSIAGIGKLAGILFCIGGVGVLAFYKGPQLNFFNHHHLFSVHNPNHHSSSVALPNTWLKGCFLMLSANTLWGIWIVLQAFVLKSYPSKLMLTNLQCLLSSFQSFAIAIAMERDPQQWKLGWNLRLLSVAYCGIVVTAVTYCLQAWVIEKKGPVYLAMSTPIALVITIFFSAVFLGESISLGSILGGLLLVGGLYFVLWGKSKEQKISEGLKEGTKECDDMEEGKDSTKLPNENPTSSVENV* | 375 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 15034798 | 15041378 | + | CsaV3_2G018030.1 | Csa02g01587 | 519644 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g01587 | 374 | MobiDBLite | consensus disorder prediction | 342 | 361 | - | - | |
Csa02g01587 | 374 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 49 | 158 | - | - | |
Csa02g01587 | 374 | PANTHER | WAT1-RELATED PROTEIN | 17 | 340 | IPR030184 | GO:0016021|GO:0022857 | |
Csa02g01587 | 374 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 250 | 335 | - | - | |
Csa02g01587 | 374 | Pfam | EamA-like transporter family | 17 | 140 | IPR000620 | GO:0016020|GO:0016021 | |
Csa02g01587 | 374 | Pfam | EamA-like transporter family | 192 | 330 | IPR000620 | GO:0016020|GO:0016021 | |
Csa02g01587 | 374 | MobiDBLite | consensus disorder prediction | 342 | 374 | - | - | |
Csa02g01587 | 374 | PANTHER | WAT1-RELATED PROTEIN | 17 | 340 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g01587 | Csa-Chr2:15034798 | Csa06g02809 | Csa-Chr6:24496090 | 3.11E-114 | dispersed | |
Csa06g02811 | Csa-Chr6:24526657 | Csa02g01587 | Csa-Chr2:15034798 | 2.18E-64 | dispersed | |
Csa02g01587 | Csa-Chr2:15034798 | Csa02g01588 | Csa-Chr2:15044269 | 7.20E-142 | tandem | |
Csa06g00524 | Csa-Chr6:4426866 | Csa02g01587 | Csa-Chr2:15034798 | 1.78E-93 | transposed | |
Csa02g01587 | Csa-Chr2:15034798 | Csa06g02805 | Csa-Chr6:24461196 | 1.51E-98 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g01587 | - | - | csv:101203024 | 699.893 |