Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01635 ATGACCTCGCCGGTTGCAGCTTCTTCCTTGAAGCTTTACTCTTACTGGAGGAGCTCTTGTTCTCACCGTGTTCGAATTGCCCTAAACCTCAAACGTCTAAATTACGAGTACAAGGCTGTTAATCTACTCAAGGGAGAGCAATTCTCACCCGAGTATGAGAAGCTTAATCCTATTGGTTATGTACCCACTCTTGTGGATGGTGATGTTGTTATTGCTGACTCTTTTGCTATAATCATGTATTTGGAGGAGAAGTACCCTCAGAATCCTCTGTTGCCTTGTGATCTTGGTAAAAGAGCTATCAACTACCAGGCTGCAAACATTGTTTCTTCTAGCATACAGCCTCTTCAAAATATAGCTGTTCTGAAGTACATTGAGGAAAAATCTGGTCCAGCAGAAAAACTTCGTTGGGTTCAACATAATATTGAAAAAGGTTTTACAGCACTTGAAAAGCTGCTAAAACCTCATGCTGGGAAATATGCTACTGGAGATGAAATCTATATGGCGGACTTGTTCTTGGCTCCTCAAATTCATGGCGCCATCAATAGATTCAATATTGACATGTCCAAATTTTCTCTATTAAACAGGTTGAATGAGGAATACAATGGTACAGCAGCATTTCAAGATGCAGCCCCAGCGGAGCAGCCTGATGCTACTCCAACCTCTACTTAG 669 41.7 MTSPVAASSLKLYSYWRSSCSHRVRIALNLKRLNYEYKAVNLLKGEQFSPEYEKLNPIGYVPTLVDGDVVIADSFAIIMYLEEKYPQNPLLPCDLGKRAINYQAANIVSSSIQPLQNIAVLKYIEEKSGPAEKLRWVQHNIEKGFTALEKLLKPHAGKYATGDEIYMADLFLAPQIHGAINRFNIDMSKFSLLNRLNEEYNGTAAFQDAAPAEQPDATPTST* 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15494439 15498052 - CsaV3_2G019500.1 Csa02g01635 519692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01635 222 SFLD Glutathione Transferase (cytosolic) 10 191 IPR040079 -
Csa02g01635 222 CDD GST_N_Zeta 10 82 IPR034333 -
Csa02g01635 222 SUPERFAMILY GST C-terminal domain-like 89 218 IPR036282 -
Csa02g01635 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 89 IPR004045 -
Csa02g01635 222 TIGRFAM maiA: maleylacetoacetate isomerase 11 217 IPR005955 GO:0003824|GO:0005737|GO:0009072
Csa02g01635 222 Gene3D Glutaredoxin 7 91 - -
Csa02g01635 222 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 7 218 - -
Csa02g01635 222 PANTHER MALEYLACETOACETATE ISOMERASE 7 218 - -
Csa02g01635 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Csa02g01635 222 Gene3D - 92 220 - -
Csa02g01635 222 CDD GST_C_Zeta 97 214 IPR034330 -
Csa02g01635 222 Pfam Glutathione S-transferase, N-terminal domain 12 89 IPR004045 -
Csa02g01635 222 SUPERFAMILY Thioredoxin-like 6 92 IPR036249 -
Csa02g01635 222 SFLD Main (cytGST) 10 191 - -
Csa02g01635 222 Pfam Glutathione S-transferase, C-terminal domain 119 195 IPR004046 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01635 Csa-Chr2:15494439 Csa03g00969 Csa-Chr3:7891319 9.86E-87 dispersed
Csa05g00668 Csa-Chr5:4484418 Csa02g01635 Csa-Chr2:15494439 5.09E-07 dispersed
Csa07g01817 Csa-Chr7:18391662 Csa02g01635 Csa-Chr2:15494439 3.52E-09 dispersed
Csa02g01635 Csa-Chr2:15494439 Csa02g01638 Csa-Chr2:15513714 3.23E-112 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01635 K01800 - csv:101213302 446.817