Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01638 ATGGCAGTGGACGAAGAATCTCCATTGAAGCTCTACTCATTCTGGGCCAGCACTTGTGCCCAACGTGTTCGAATTGCCCTCAACCTAAAAGGACTAAACTTTCAGTATAAAGCTGTTGATATTTTGAAGGGAGAGCATTTGGCTCCTGAATATCTAAAGCTCAATCCTGTTGGTTTTGTACCTACTCTTGTGGATGGAGATGTTGTTATTGCTGACTCTTTTGCTATAATAATGTATTTGGAGGAAAAGTATCCTGAGCGTCCTTTGCTGCCTACTGATCTTGTTAAAAGGGCTATTAATCACCAGGTTGCAAATATTGTTTCTTCAAGCATACAGCCTCTTCAAAATTTAATTGTTGAGAAATACATTGAGGAAAAATGTGGTACTGAGGAGAAACTTTCTTGGGTTCACATGATCATTGGAAAAGGTTTTTTAGCACTAGAAAAGTTGCTAACAGTTGAAGCTGGAAATTTTGCTACTGGAGACCAAATTTATATGGCAGACTTGTTTTTGGCACCTCAACTTCATCGGGCCATTGAAACATTCAATCTTGACATGTCCAAGTTTCCAATTCTATCAAGGTTGTACGAAGAATACAAGAAGATAGCAGCATTTCAAGATGCAGCACCAGAAAACCAACCCGATGCTCCCTCTCAAAACTGA 663 39.52 MAVDEESPLKLYSFWASTCAQRVRIALNLKGLNFQYKAVDILKGEHLAPEYLKLNPVGFVPTLVDGDVVIADSFAIIMYLEEKYPERPLLPTDLVKRAINHQVANIVSSSIQPLQNLIVEKYIEEKCGTEEKLSWVHMIIGKGFLALEKLLTVEAGNFATGDQIYMADLFLAPQLHRAIETFNLDMSKFPILSRLYEEYKKIAAFQDAAPENQPDAPSQN* 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15513714 15515957 - CsaV3_2G019530.1 Csa02g01638 519695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01638 220 Pfam Glutathione S-transferase, N-terminal domain 11 88 IPR004045 -
Csa02g01638 220 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 7 216 - -
Csa02g01638 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 218 IPR010987 -
Csa02g01638 220 SUPERFAMILY GST C-terminal domain-like 88 217 IPR036282 -
Csa02g01638 220 Gene3D Glutaredoxin 7 92 - -
Csa02g01638 220 CDD GST_N_Zeta 9 81 IPR034333 -
Csa02g01638 220 SFLD Glutathione Transferase (cytosolic) 9 200 IPR040079 -
Csa02g01638 220 TIGRFAM maiA: maleylacetoacetate isomerase 10 216 IPR005955 GO:0003824|GO:0005737|GO:0009072
Csa02g01638 220 Gene3D - 93 219 - -
Csa02g01638 220 CDD GST_C_Zeta 94 213 IPR034330 -
Csa02g01638 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 88 IPR004045 -
Csa02g01638 220 SUPERFAMILY Thioredoxin-like 7 91 IPR036249 -
Csa02g01638 220 SFLD Main (cytGST) 9 200 - -
Csa02g01638 220 PANTHER MALEYLACETOACETATE ISOMERASE 7 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01638 Csa-Chr2:15513714 Csa03g00969 Csa-Chr3:7891319 1.07E-80 dispersed
Csa02g01635 Csa-Chr2:15494439 Csa02g01638 Csa-Chr2:15513714 3.23E-112 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01638 K01800 - csv:116401624 438.728