Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01677 ATGATTTGGCTATCGGTGACGGAAAAAGTGGCGGCGCCGCCGGTGTGGCTGATGTGCCTTTACATTTGCATAGGGGCGAATTCGACGTCGTTTGCGAATACGGGGGCGTTGGTGACTTGTGTGAAGAATTATCCGGCGAGAAGAGGAGCGGTTTTAGGGATTTTGAAAGGATATGTGGGATTAAGCGGTGCAATTATGACGCAATTTTATCATGCGATTTATGGAGATGATTCGAAATCGTTGATTCTTCTTATTGCTTGGCTTCCGGCGGTGATTTTGGTGGTGTTCTTGAGGACGATTCGGATTATGAAGGTTCAACATCGGCCTAATGAACTCACA 339 46.9 MIWLSVTEKVAAPPVWLMCLYICIGANSTSFANTGALVTCVKNYPARRGAVLGILKGYVGLSGAIMTQFYHAIYGDDSKSLILLIAWLPAVILVVFLRTIRIMKVQHRPNELT 113
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 16011104 16011442 + CsaV3_2G020910.1 Csa02g01677 519734
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01677 113 SUPERFAMILY MFS general substrate transporter 12 106 IPR036259 -
Csa02g01677 113 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 112 - -
Csa02g01677 113 PANTHER MFS TRANSPORTER 1 112 - -
Csa02g01677 113 Pfam Nodulin-like 1 105 IPR010658 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01677 Csa-Chr2:16011104 Csa05g02780 Csa-Chr5:28460136 4.73E-56 dispersed
Csa02g01677 Csa-Chr2:16011104 Csa02g01686 Csa-Chr2:16082223 7.89E-76 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01677 - - csv:101208506 229.95