Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Csa02g01677 | ATGATTTGGCTATCGGTGACGGAAAAAGTGGCGGCGCCGCCGGTGTGGCTGATGTGCCTTTACATTTGCATAGGGGCGAATTCGACGTCGTTTGCGAATACGGGGGCGTTGGTGACTTGTGTGAAGAATTATCCGGCGAGAAGAGGAGCGGTTTTAGGGATTTTGAAAGGATATGTGGGATTAAGCGGTGCAATTATGACGCAATTTTATCATGCGATTTATGGAGATGATTCGAAATCGTTGATTCTTCTTATTGCTTGGCTTCCGGCGGTGATTTTGGTGGTGTTCTTGAGGACGATTCGGATTATGAAGGTTCAACATCGGCCTAATGAACTCACA | 339 | 46.9 | MIWLSVTEKVAAPPVWLMCLYICIGANSTSFANTGALVTCVKNYPARRGAVLGILKGYVGLSGAIMTQFYHAIYGDDSKSLILLIAWLPAVILVVFLRTIRIMKVQHRPNELT | 113 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 16011104 | 16011442 | + | CsaV3_2G020910.1 | Csa02g01677 | 519734 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Csa02g01677 | 113 | SUPERFAMILY | MFS general substrate transporter | 12 | 106 | IPR036259 | - | |
| Csa02g01677 | 113 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 1 | 112 | - | - | |
| Csa02g01677 | 113 | PANTHER | MFS TRANSPORTER | 1 | 112 | - | - | |
| Csa02g01677 | 113 | Pfam | Nodulin-like | 1 | 105 | IPR010658 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Csa02g01677 | Csa-Chr2:16011104 | Csa05g02780 | Csa-Chr5:28460136 | 4.73E-56 | dispersed | |
| Csa02g01677 | Csa-Chr2:16011104 | Csa02g01686 | Csa-Chr2:16082223 | 7.89E-76 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Csa02g01677 | - | - | csv:101208506 | 229.95 |