Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01686 ATGGAGGTTACCGGGAGCGGCAGAGCAAGGGACCGCGGCGGAAGTTCATCAATGGAGATAGAGCGTCGTTCCCTAAGAGCAATAACGACCTCCTTCTTCGTCGAAGTTCTAACCGGACCTTGGTTCATGGTATTCGCTTCATTCCTAATCATGTCCACCGCCGGAACGCCTTACATGTTCGGCCTTTACTCCGGCGCCATAAAATCAGTCCTCGGCTACGACCAGAGCACTCTGAATCTAATTAGCTTCTTCAAAGACCTAGGCACAAACGTGGGCATAATTGCCGGACTAATCGCGGAAATCATGCCACCGTGGGTGGTTTTGGCGATCGGAGCAGGGATGAATTTCGTGGGATACTTCATGATTTGGCTATCGGTGACGGAAAAAGTGGCGGCGCCGCCGGTGTGGCTGATGTGCCTTTACATTTGCATAGGGGCGAATTCGACGTCGTTTGCGAATACGGGGGCGTTGGTGACTTGTGTGAAGAATTATCCGGCGAGAAGAGGAGCGGTTTTAGGGATTTTGAAAGGATATGTGGGATTAAGCGGTGCAATTATGACGCAATTTTATCATGCGATTTATGGAGATGATTCGAAATCGTTGATTCTTCTTATTGCTTGGCTTCCGGCGGTGATTTTGGTGGTGTTCTTGAGGACGATTCGGATTATGAAGGTTCAACATCGGCCTAATGAACTCACAGTTTTTTACAGATTCTTGTACGTTTCTCTTGCTCTAGCCGGGTTTCTCATGGTGATGATCGTTCTTCAACAAAAATTTAATTTCTCCCGTATTGAGTACAGTTCCAGCGCCGCCGTCGTCGTCTTTCTCCTCTTTTTTCCCGTCTTCATCGTCATCGCCGAAGACTACAAATTCTGGCGCATAAAACTATCTCAACTCCTAAATCCTTCTCCACTCACAATCATCACCCAAAAGCCAACACCGCCGCCGCCGCAAAACCTCGGAACCTTCGGCATATCTCCCGCCGTGAAACCGACGTCATCAACGCCGTCCTGCTGGACAACCCCACTGAAGCCCCCTCCAAGAGGTGAAGATTACACGATTCTACAAGCGCTCTTCAGCGCCGACATGTTCCTTCTTTTCCTCTCCACCGCGTGCGGCGTCGGCGGCACTCTCACCGCCATCGACAACCTCGGCCAAATCGGCGCTTCTCTAAAGTATCCTAAACAGAGCATTAGCACATTTGTATCATTAGTAAGTATTTGGAATTACCTAGGGCGCGTAGTTTCGGGTTTCACCTCCGAAATTTTCCTCAGCAAATACAAATTCCCTCGAACCCTAATTTTAACCTTAATTCTCCTCCTCTCCTGCGTCGGCCATATCCTAATCGCCTTCAACCCTCCTGGCGGCCTCTACTTCGCCTCAATCGTAATCGGATTCTGCTACGGCGCTCAGTGGCCGATTCTATTCGCCATAATCTCAGAGATCTTCGGCCTCAAATACTATTCCACGCTTTACAATTTCGGATCCGTTGCGAGCCCGATCGGGTTGTATTTTGTGAATGTTCGAGTCGCTGGACATTTGTACGACGAGGAGGCGAAGCGGCAGTTGGCAGCGTCCGGGATGAAGAGGATGCCTGGAAAAGAATTGAACTGCGTTGGTGTGGATTGCTTTAAAATGTCGTTCATTATAATCACCGGAGTTACACTGCTTGGTGCTCTATTCTCATTTGTTTTGGTTCTTAGAACTAGAGCCTTTTATAAGACTGATATTTATAGGAAGTTTAGGGAGGAGGTTGATGAAGGTGAAGCTGCTGGAAACGACGTCGTTTCCAATAATGACAGAAATGTTGAAGCCAACAACTTTGGAGTTGTTCTAATGGAACTAGCAACAGGAAAGCAACCCATTTTCTAA 1872 48.24 MEVTGSGRARDRGGSSSMEIERRSLRAITTSFFVEVLTGPWFMVFASFLIMSTAGTPYMFGLYSGAIKSVLGYDQSTLNLISFFKDLGTNVGIIAGLIAEIMPPWVVLAIGAGMNFVGYFMIWLSVTEKVAAPPVWLMCLYICIGANSTSFANTGALVTCVKNYPARRGAVLGILKGYVGLSGAIMTQFYHAIYGDDSKSLILLIAWLPAVILVVFLRTIRIMKVQHRPNELTVFYRFLYVSLALAGFLMVMIVLQQKFNFSRIEYSSSAAVVVFLLFFPVFIVIAEDYKFWRIKLSQLLNPSPLTIITQKPTPPPPQNLGTFGISPAVKPTSSTPSCWTTPLKPPPRGEDYTILQALFSADMFLLFLSTACGVGGTLTAIDNLGQIGASLKYPKQSISTFVSLVSIWNYLGRVVSGFTSEIFLSKYKFPRTLILTLILLLSCVGHILIAFNPPGGLYFASIVIGFCYGAQWPILFAIISEIFGLKYYSTLYNFGSVASPIGLYFVNVRVAGHLYDEEAKRQLAASGMKRMPGKELNCVGVDCFKMSFIIITGVTLLGALFSFVLVLRTRAFYKTDIYRKFREEVDEGEAAGNDVVSNNDRNVEANNFGVVLMELATGKQPIF* 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16082223 16086566 - CsaV3_2G021090.1 Csa02g01686 519743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01686 623 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 599 - -
Csa02g01686 623 PANTHER MFS TRANSPORTER 28 599 - -
Csa02g01686 623 CDD MFS_Mch1p_like 39 559 - -
Csa02g01686 623 SUPERFAMILY MFS general substrate transporter 43 287 IPR036259 -
Csa02g01686 623 Gene3D MFS general substrate transporter like domains 358 574 IPR036259 -
Csa02g01686 623 SUPERFAMILY MFS general substrate transporter 231 571 IPR036259 -
Csa02g01686 623 Pfam Major Facilitator Superfamily 371 570 IPR011701 GO:0022857|GO:0055085
Csa02g01686 623 Pfam Nodulin-like 40 285 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01686 Csa-Chr2:16082223 Csa05g02780 Csa-Chr5:28460136 0 dispersed
Csa02g01677 Csa-Chr2:16011104 Csa02g01686 Csa-Chr2:16082223 7.89E-76 wgd
Csa02g01686 Csa-Chr2:16082223 Csa05g02773 Csa-Chr5:28438039 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01686 - - csv:101208506 1187.17