Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01714 ATGTCTAGTCTCTTCTTCACCTTTCTTCTCCTCTTTTTTTCCTTGCTTCTTCCTTCTCTCAATGCCTTGAGCCACCATTACTATGACCACACATGCCCTAATCTCGAGTCCATCGTCGCTCGAGAAGTTCGCTTAGCCACTGCAAACGACAAGACCGTTCCTGCTGCGTTGCTGAGAATGCACTTCCATGATTGTTTCATCAGAGGTTGCGATGGCTCTGTACTTCTCGACTCCAAGGGGAAGAACACGGCTGAAAAAGATGGCCCTCCTAATATCTCTCTCCATGCTTTTTATGTCATTGACAACGCCAAGAAAGCAATTGAATCTACTTGTCCGGGCGTAGTTTCTTGTGCTGATATCTTAGCTCTTGCTGCTCGAGATGCTGTTGTTGTGTCGGGAGGTCCTCACTGGGAAGTCCCAAAAGGAAGAAAAGATGGAAGAATCTCAAAAGCTAGTGAAACAAGACAATTACCAGCTCCCACATTCAACTTCTCTCAACTCCAACAAAGCTTCTCCCAGAGAGGCCTTTCTTTACATGATCTTGTCGCTCTTTCAGGAGGCCACACTCTTGGATTTGCCCATTGCTCGTCATTTCAAAACCGAATCCACAACTTCAACTCGAGCCTCGATGTCGACCCATCATTGGATTCAAGCTTTGCAGCCAGTCTACGTAGGGTATGTCCAGCGAGAAACAAGGTGAAAAACGCAGGGTCAACCATGGATTCGAGTTCAACAGTATTTGACAATGCATATTACAAGCTTCTTCTTGAAGGGAAGAGCATATTTTCATCAGATCAATCTTTGCTTTCAACACCAAAAACAAAGGCTTTGGTTTCAAAATTTGCCAACGAACAACATCTGTTTGAGAAAGCTTTTGTTAAGTCCATGGTGAAGATGAGTCAGATAGCCGGCGCCGGGCAAGAGGTTCGGCTGAACTGCAGGCTGATCAGATGA 954 45.49 MSSLFFTFLLLFFSLLLPSLNALSHHYYDHTCPNLESIVAREVRLATANDKTVPAALLRMHFHDCFIRGCDGSVLLDSKGKNTAEKDGPPNISLHAFYVIDNAKKAIESTCPGVVSCADILALAARDAVVVSGGPHWEVPKGRKDGRISKASETRQLPAPTFNFSQLQQSFSQRGLSLHDLVALSGGHTLGFAHCSSFQNRIHNFNSSLDVDPSLDSSFAASLRRVCPARNKVKNAGSTMDSSSTVFDNAYYKLLLEGKSIFSSDQSLLSTPKTKALVSKFANEQHLFEKAFVKSMVKMSQIAGAGQEVRLNCRLIR* 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16871896 16873634 + CsaV3_2G024340.1 Csa02g01714 519771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01714 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Csa02g01714 317 Gene3D Peroxidase, domain 2 158 299 - -
Csa02g01714 317 PANTHER PEROXIDASE 25-RELATED 8 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 ProSiteProfiles Plant heme peroxidase family profile. 22 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 Pfam Peroxidase 40 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 Gene3D - 26 315 - -
Csa02g01714 317 SUPERFAMILY Heme-dependent peroxidases 23 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa02g01714 317 PANTHER PEROXIDASE 64 8 316 - -
Csa02g01714 317 CDD secretory_peroxidase 23 316 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01714 Csa-Chr2:16871896 Csa06g03357 Csa-Chr6:27981854 5.39E-156 dispersed
Csa02g01714 Csa-Chr2:16871896 Csa07g00375 Csa-Chr7:2787973 1.60E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01714 K00430 - csv:101214403 592.808