Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01836 ATGTTCTTCTTTGAGGATTTGTTGCAGATGCTCTGTATTCGAGGTTTTCAGGATAAAACTCGACTTCTTTCTGAGTCTTTTATACGGACCGTATCTGAATCCATGGCCAATTCTGCTTGTGGGGTTTCGGAGTTAGAACTCTGTAGAAACGATTCGGCTGCGCTTCATTTTAAATTAATCGCCATCGCGTCAATTTTAACAGCCGGAGTCATCGGGATCGCTCTTCCGTTGTTTGGTAAACAGCGTCGGTTTCTCAAAACAGACGGCAACCTATTCGTGGCGGCAAAGGCGTTTGCCGCTGGTGTGATTCTAGCCACCGCCTTCGTCCATATGCTTCCGGATGGATCGAAAGCTCTCTCGGATCCGTGCTTGCCGGAATTTCCATGGTCGAAATTCCCCTTCTCTGGGTTCTTCGCGATGATGGCGTCGCTCTTGACGCTGCTCGTGGACTTCGTCGGAACTCAGTACTACGAGCGGAAACAGGGAATAATTCGGTCGAAAGAGGAGGCGAATCGAGTCGGGTCATTGATGGATACCGGGTTGGAATCCGGCATTGTTCCGGCTGGAGATTTGAACGTGAAAGTGTTTGGGGAAGAGGAGGGCGGCGGGATGCACATCGTGGGAATGCACGCCCACGCCGCCCACCACCGGCACAATCATCCACAAGGGAAGGAGGCATGTGACGGGCACATGGGAGTTCATGATCATGGGCATGGACATGCCCATGGACACGGCCATTCTCATGGGCTGGACGGAGATGATGACGAAAGCGGTGTGCGACATGTCGTTGTTTCCCAGATTTTGGAGCTTGGAATAGTGTCACATTCAGTGATAATTGGGCTATCTCTTGGAGTGTCCCACAGCCCATGCACCATTAGACCCTTAATTGCAGCCCTTTCCTTCCACCAGTTCTTTGAAGGCTTTGCCCTTGGTGGCTGCATTTCCCAGGCTCAATTCAACACACTCTCTACCTCCCTCATGGCTGTCTTCTTTGCCATCACCACACCCCTCGGGATCGCTGTTGGCGCTGCCGTTGCCTCCACCTATAACCCCAACAGCACGGGGGCGTTGGTTGCTGAAGGCATTTTGGACTCTCTATCAGCTGGAATTCTGGTGTACATGGCTCTTGTTGATTTGATTGCGGCTGACTTTCTTAGCAAGAGAATGAGCTGCAATTTTAGACTCCAACTTGTTTCGTATTGTACTCTCTTTCTCGGCGCTGGGTTGATGTCTTCGCTCGCACTCTGGGCTTGA 1254 51.44 MFFFEDLLQMLCIRGFQDKTRLLSESFIRTVSESMANSACGVSELELCRNDSAALHFKLIAIASILTAGVIGIALPLFGKQRRFLKTDGNLFVAAKAFAAGVILATAFVHMLPDGSKALSDPCLPEFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGIIRSKEEANRVGSLMDTGLESGIVPAGDLNVKVFGEEEGGGMHIVGMHAHAAHHRHNHPQGKEACDGHMGVHDHGHGHAHGHGHSHGLDGDDDESGVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTLSTSLMAVFFAITTPLGIAVGAAVASTYNPNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQLVSYCTLFLGAGLMSSLALWA* 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17564303 17567793 + CsaV3_2G025560.1 Csa02g01836 519893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01836 417 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 35 417 - -
Csa02g01836 417 PANTHER ZINC/IRON TRANSPORTER 35 417 - -
Csa02g01836 417 Pfam ZIP Zinc transporter 56 414 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Csa02g01836 417 MobiDBLite consensus disorder prediction 232 255 - -
Csa02g01836 417 TIGRFAM zip: ZIP zinc/iron transport family 40 417 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01836 Csa-Chr2:17564303 Csa06g03640 Csa-Chr6:29322423 4.85E-31 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01836 K14709 - csv:101218224 771.541