Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01868 ATGGCTTCTTGGTGGGGAAGAGAAAGTCACAAGGGAACCCCTGTCGTTGTGAAGATGGAAAATCCCAACTGGTCAATAGTTGAAGTTGAAAGTCCTTCCGACGAGGACTTCATAATCGGCGCCGAGTCGCCACCGGGTCGAGCCCGAGACAAGGGACGAGGCAAAAATGCCAAACAACTCACTTGGGTTCTTCTTCTTAAAGCCCACAAAGCCGCCGGTTGTTTAACCTCCATTGGCTCTGCATTGGTCAACATCGTCACCGTCGTTAAACGCCGTCTTGCTTCTGGAAGAACGGACGCCGACACCGACGCCGACAATGACAACGCTGACGGCGGCGTGAGGGAGAACCCAATTGTTAAAACCAGGTTCTATTTGTTTATCAAGGTTTTCCTTTGGCTGTCGGTGCTTCTGTTAGGGTTTGAGTTGGCGGCTTATTATAAAGGTTGGCATTTTGAGGCACCCCATCTTCAATTGGACTACTTGTGGACAACCCCATTTGGGGTTAAGGATGCTTTTGACTGGTTATATTCCAAATGGGTTGTAATTCGGGTTGCATATTTTGCTCCGCCTCTGCAGTTTTTAGCCAATGTTTGTATAGTGTTGTTCCTCATTCAAACTTTGGATAGGCTTATTCTATGTCTGGGTTGTTTCTGGATTCGATTCAAGAAAATCAAACCTGTTCCTAAGGATGCTGCTATGGATCTTGAGTCTGGTGAAACTGGCTACTTCCCTATGGTTCTTGTTCAGATCCCAATGTGCAATGAGAAAGAGGTTTATCAGCAATCAATTGCTGCTGTCTGCAACTTGGACTGGCCAAAAGACAAGTTACTGATTCAGGTTCTTGATGACTCGGATGATCCAATCACCCAATTGCTGATCAAAGAGGAGGTACATAAATGGCAACAACTCGATGCCAAAATTGAATATCGACATCGGGTGATCCGAGAGGGATATAAGGCTGGCAATCTCAAGTCTGCCATGAATTGTAGCTCTGTCAAAGACTACGAGTTTGTTGCTATCTTTGATGCTGATTTTCAGCCTGCTTCTGATTTCCTCAAAAGAACAGTTCCTCATTTTAAGGATAATGAGGAACTAGGACTCGTTCAAGCACGATGGTCATTCGTGAACAAAGACGAGAACTTGCTAACCAGACTACAGAATATTAACTTAGCCTTCCATTTTGAAGTAGAGCAACAAGTGAATGGCGTGTTTCTTAATTTCTTTGGATTCAACGGAACTGCTGGTGTTTGGAGGATAAAGGCTCTTGAAGAAGCCGGTGGCTGGTTGGAAAGGACCACTGTCGAGGACATGGACATTGCCGTCCGTGCTCATCTTCATGGTTGGAAATTCATATTCCTCAATGACGTAGAGTGCCAATGTGAATTACCAGAATCGTACGAAGCATATAGAAAACAACAGCATAGATGGCATTCGGGACCAATGCAACTGTTTCGACTTTGTTTGCCCGATATAGTTCATTCAAAGATTGGCATATCAAAGAAATTCAATTTGATCTTCCTATTTTTTCTCTTACGGAAGCTGATACTGCCATTTTATTCATTTACCCTCTTCTGCATAATTCTCCCAATGACGATGTTTGTTCCTGAAGCTGAGTTGCCGGCGTGGGTTGTATGTTACATTCCAGCTACAATGTCCTTTCTCAACATCCTTCCAGCACCAAAGTTCTTCCCCTTCATTGTTCCTTACCTCCTCTTTGAGAATACTATGTCAGTAACTAAGTTTAACGCAATGGTCTCGGGACTCTTCCAGCTAGGTAGTGCATATGAGTGGGTTGTTACGAAGAAATCAGGCCGCTCGTCTGAGGGTGATCTTTCCTCAATGGTTGAGAAGAAAAGGATGAATTCTGAAAAGAGTGTCTCAGCAAACAACCTTGAGGAGATTGAATTAATCCAAAAACAGGACAAGAAGTTGCCAAGGAAGAAGCATAACAGAATATACGTGAAGGAGCTAGCACTAGCTTTCCTTCTTTTAACAGCCTCAGCTAGAAGCCTCCTCTCAGCTCAAGGGATTCATTTTTACTTCCTGCTGTTTCAGGGAATATCCTTCCTTCTTGTTGGTTTAGACTTGATCGGCGAGCAAGTTGTTTAA 2109 43.95 MASWWGRESHKGTPVVVKMENPNWSIVEVESPSDEDFIIGAESPPGRARDKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSALVNIVTVVKRRLASGRTDADTDADNDNADGGVRENPIVKTRFYLFIKVFLWLSVLLLGFELAAYYKGWHFEAPHLQLDYLWTTPFGVKDAFDWLYSKWVVIRVAYFAPPLQFLANVCIVLFLIQTLDRLILCLGCFWIRFKKIKPVPKDAAMDLESGETGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKDKLLIQVLDDSDDPITQLLIKEEVHKWQQLDAKIEYRHRVIREGYKAGNLKSAMNCSSVKDYEFVAIFDADFQPASDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIVHSKIGISKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKFFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLSSMVEKKRMNSEKSVSANNLEEIELIQKQDKKLPRKKHNRIYVKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVV* 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17772506 17776335 + CsaV3_2G025880.1 Csa02g01868 519925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01868 702 Pfam Glycosyl transferase family group 2 338 544 IPR001173 -
Csa02g01868 702 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 543 IPR029044 -
Csa02g01868 702 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 461 IPR029044 -
Csa02g01868 702 PANTHER - 8 701 - -
Csa02g01868 702 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 8 701 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa02g01868 Csa04g02506 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01868 Csa-Chr2:17772506 Csa03g04414 Csa-Chr3:38476463 0 dispersed
Csa02g01868 Csa-Chr2:17772506 Csa04g02506 Csa-Chr4:24889393 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01868 - - csv:101203245 1368.6