Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01905 ATGAAAACTTGCAGAGTTTCACAATGGTTTCTTCTGTTCTTGATTTCATTCTGTTCATGTTCATTTACAGAAGCTCAGAAGAGCAATCAGCAGTTGAAGAAGAAGACTTACATAATTCACATGGACAAAACAAATATGCCACAAGCCTTTGATGATCATTTCCAATGGTATGATTCTTCTTTGAAATCAGTTTCTGATTCTGCTCAAATGCTTTATTCCTACAACACCGTGATTCATGGCTTCTCCACAAGATTGACTGTGGAGGAGGCTAAGTTAATGGAAAAACAAGAGGGAATTATTGCTGTCATACCTGAAATGAAGTACGAGCTTCATACCACTCGCACACCTGAGTTTCTTGGACTTGGGAAGAGTGTTTCTTTCTTCCCAGCGTCGGAGAAGGTCAGCGAAGTGATCATCGGAGTTCTTGACACCGGTGTATGGCCTGAATTGGAGAGTTTCAGTGATGCTGGGCTTGGACCAATACCTGCAAGTTGGAAAGGGGAGTGTGAAGTAGGTAAAAACTTCACTTCTTCTAATTGCAACAGGAAATTGATAGGAGCAAGGTACTTTTCCAAGGGCTATGAAGCAGCATTTGGGCCAATTGATGAATCCCAGGAGTCGAAATCCCCAAGGGACGACGATGGCCACGGTTCTCACACATCAACAACTGCTGCAGGATCCGCTGTTACAGGTGCTAACCTCTTTGGTTTTGCTGCCGGGACTGCAAGAGGAATGGCGGCTGAAGCTCGAGTTGCAACGTATAAGGTATGTTGGCTTGGAGGGTGTTTCAGCAGTGACATTTTAGCTGCAATGGATAAGTCTGTTGAGGATGGTTGCAATATTCTATCCGTGTCGCTTGGTGGAAACAGCGCAGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTACAGCTCAGGGAGTTTTTGTGTCATGTTCTGCCGGAAATGGTGGCCCATCATCGAGTACCCTGTCCAATGTGGCGCCATGGATAACTACCGTTGGCGCCGGGACGCTGGACAGGGACTTCCCAGCATACGTTACTCTCGGAAATGGGAAGAAGATAACAGGGGAATCGCTCTATAGTGGAAAGCCTTTGCCGAATTCTTTACTACCAATTGTATCGGCAGCCAGTGCGAGTAATTCATCCAGTGGTAGCCTTTGCTTGAGCGGTACTCTGAATCCGGCGAAGGTCACCGGAAAAATAGTCGTTTGTGACAGAGGAGGGAACTCTCGAGTTCAAAAAGGGGTGGTGGTAAAAGAAGCCGGTGGTTTAGGGATGATTCTAGCTAACACTGAAGCATATGGGGAAGAACAATTAGCCGATGCACATCTCATACCCACGGCGGCCGTCGGTCAAAAAGCCGGCGACGCAATAAAGAACTACATCTCCTCTGATTCAAACCCAACAGCAACAATCAGCACCGGCACCACAAGATTAGGAGTTCAACCGTCCCCGGTGGTGGCCGCATTCAGTTCTCGTGGCCCTAATCTCCTGACTCCACAGATTCTCAAACCCGATTTGATAGCACCGGGTGTGAACATTCTGGCTGGATGGACCGGCGGCGCTGGACCAACTGGTTTAGACAGCGATAAGAGACATGTGGCCTTCAACATCATCTCTGGGACATCAATGTCTTGCCCTCACATCAGTGGATTAGCCGCTCTTGTTAAAGCCGCTCATCCAGATTGGAGCCCAGCCGCCATTAGATCAGCTCTAATGACCACAGCATACTCAACATACAAAAATGGCGAAATGATTCAAGACATATCCAACGGATCACCGTCGACCCCGTTCGATATCGGAGCCGGACACGTAAATCCAACGGCTGCCCTCGATCCCGGCCTTGTTTACGATACCACCACCGACGACTACTTGGCCTTCCTCTGTGCCCTAAACTACAGCTCACTTCAAATTAAAGTAATCAGCAAGAAAGATTTCACATGCAATGGAAACAAGAACTACAAATTGGAGGATTTAAACTACCCTTCATTTGCAGTTCCATTAGAAACACCTTCCACCAGAGGAGGTGAAAATGTTGCTCCCACCACCATAAAATATACAAGGACCCTGACCAACAAGGGTGCTTCATCGACGTATAAAGTGTCAGTGACGGCGAAAAGTTCATCGGTGAAGATTGTGGTGGAGCCGGAATCATTGAGTTTTACGGAGGTAAATGAGCAGAAGAGTTATACAGTGACTTTCATTGCTTCTCCAATGCCGTCGGGGTCTCAGAGCTTTGCTCGTTTGGAATGGTCAGATGGGAAACACATTGTGGGAAGCCCCATTGCTTTCACTTGGACTTAA 2313 47.21 MKTCRVSQWFLLFLISFCSCSFTEAQKSNQQLKKKTYIIHMDKTNMPQAFDDHFQWYDSSLKSVSDSAQMLYSYNTVIHGFSTRLTVEEAKLMEKQEGIIAVIPEMKYELHTTRTPEFLGLGKSVSFFPASEKVSEVIIGVLDTGVWPELESFSDAGLGPIPASWKGECEVGKNFTSSNCNRKLIGARYFSKGYEAAFGPIDESQESKSPRDDDGHGSHTSTTAAGSAVTGANLFGFAAGTARGMAAEARVATYKVCWLGGCFSSDILAAMDKSVEDGCNILSVSLGGNSADYYRDNVAIGAFSATAQGVFVSCSAGNGGPSSSTLSNVAPWITTVGAGTLDRDFPAYVTLGNGKKITGESLYSGKPLPNSLLPIVSAASASNSSSGSLCLSGTLNPAKVTGKIVVCDRGGNSRVQKGVVVKEAGGLGMILANTEAYGEEQLADAHLIPTAAVGQKAGDAIKNYISSDSNPTATISTGTTRLGVQPSPVVAAFSSRGPNLLTPQILKPDLIAPGVNILAGWTGGAGPTGLDSDKRHVAFNIISGTSMSCPHISGLAALVKAAHPDWSPAAIRSALMTTAYSTYKNGEMIQDISNGSPSTPFDIGAGHVNPTAALDPGLVYDTTTDDYLAFLCALNYSSLQIKVISKKDFTCNGNKNYKLEDLNYPSFAVPLETPSTRGGENVAPTTIKYTRTLTNKGASSTYKVSVTAKSSSVKIVVEPESLSFTEVNEQKSYTVTFIASPMPSGSQSFARLEWSDGKHIVGSPIAFTWT* 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18004320 18007286 + CsaV3_2G026250.1 Csa02g01905 519962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01905 770 Pfam Fibronectin type-III domain 661 766 IPR041469 -
Csa02g01905 770 Gene3D Peptidase S8/S53 domain 137 627 IPR036852 GO:0004252|GO:0006508
Csa02g01905 770 MobiDBLite consensus disorder prediction 201 224 - -
Csa02g01905 770 SUPERFAMILY Subtilisin-like 110 618 IPR036852 GO:0004252|GO:0006508
Csa02g01905 770 ProSiteProfiles Serine proteases, subtilase domain profile. 107 614 - -
Csa02g01905 770 Pfam Subtilase family 135 585 IPR000209 GO:0006508|GO:0008236
Csa02g01905 770 CDD Peptidases_S8_3 108 580 IPR034197 -
Csa02g01905 770 Pfam PA domain 381 461 IPR003137 -
Csa02g01905 770 Gene3D - 342 482 - -
Csa02g01905 770 SUPERFAMILY PA domain 397 470 IPR046450 -
Csa02g01905 770 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Csa02g01905 770 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Csa02g01905 770 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Csa02g01905 770 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 24 768 - -
Csa02g01905 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 768 IPR045051 -
Csa02g01905 770 CDD PA_subtilisin_like 348 475 - -
Csa02g01905 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 111 IPR037045 -
Csa02g01905 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Csa02g01905 770 Gene3D - 631 769 - -
Csa02g01905 770 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Csa02g01905 770 Pfam Peptidase inhibitor I9 36 111 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01905 Csa-Chr2:18004320 Csa03g01651 Csa-Chr3:12329555 0 dispersed
Csa02g01896 Csa-Chr2:17942953 Csa02g01905 Csa-Chr2:18004320 5.47E-168 proximal
Csa07g00232 Csa-Chr7:1828536 Csa02g01905 Csa-Chr2:18004320 0 transposed
Csa02g01905 Csa-Chr2:18004320 Csa06g02998 Csa-Chr6:25857587 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01905 - - csv:101207099 1479.92