Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01949 ATGGCTTCAATTTTTCTACTCTTTTCCATCTTCCTTCTCCCCCTTCTTCTTCTATTATTCTTCCTCCAAATTCATAACAACAATAAGTTCCTTATCAACAAACTCCCTCCGGGTTCAATGGGTTGGCCTTTAATCGGGGAAACCTTTCATTTTTATTCCCAACATCCAACCTCCTTTTTCCTTGGAAAGCAAAAAAGATATGGAGAGATATTCAAGACCCACATTCATGGGTGTCCGTGTGTGATGTTAGCGACGCCCGAGGCCGCTCGGTTCATCCTAGTCACACAAGCTCATCTCTTTAAACCTACATATCCACAAAGCAAAGAGCGATTAATTGGACCATCGGCTCTGTTTTTCCACCAAAGTGAGACCCATTTGCGCCTGCGTAAGCTTATACAAAGCTCCCTCTCACCGGACCCTGTTCGAGCCTTGGTCCCTCACATCCACGCCTTAGCCATCTCTGCATTGCCCTCATCGCTTAATAATGGTCATCTCATTGACACTTACCATCAAATGAAGAAGGTGAATCTCTCTTTT 537 44.32 MASIFLLFSIFLLPLLLLLFFLQIHNNNKFLINKLPPGSMGWPLIGETFHFYSQHPTSFFLGKQKRYGEIFKTHIHGCPCVMLATPEAARFILVTQAHLFKPTYPQSKERLIGPSALFFHQSETHLRLRKLIQSSLSPDPVRALVPHIHALAISALPSSLNNGHLIDTYHQMKKVNLSF 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18263195 18263849 + CsaV3_2G026690.1 Csa02g01949 520006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01949 179 Gene3D Cytochrome P450 25 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01949 179 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 16 176 - -
Csa02g01949 179 Pfam Cytochrome P450 36 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01949 179 PANTHER CYTOCHROME P450 26 16 176 - -
Csa02g01949 179 SUPERFAMILY Cytochrome P450 34 174 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01949 Csa-Chr2:18263195 Csa07g00762 Csa-Chr7:5351643 1.76E-57 dispersed
Csa02g01949 Csa-Chr2:18263195 Csa04g02406 Csa-Chr4:24307454 2.24E-72 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01949 K09843 - csv:101213916 217.238