Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g01959 | TATTTAATACCAAAGGGTTGGAAAGTAATGCCTTTGTTCAGGAATATTCATCACAATCCTGACTACTTTGTTGACCCTCATAAATTTGATCCTTCAAGATTTGAGGTTGCTCCAAGACCCAATACATTCATGCCATTTGGCAGTGGCGTCCATGCCTGCCCTGGGAATGAGCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATCTAGTCACCAATTTCAGGTGGGAATTGGCAGGACAGAGAGATGGAATTGAGCATGGGCCATTTCCAGTGCCTATAAATGGACTTCCCATCAGAGTTTGGAGATTATCCACTTTAAATTAA | 327 | 42.2 | YLIPKGWKVMPLFRNIHHNPDYFVDPHKFDPSRFEVAPRPNTFMPFGSGVHACPGNELAKLEILIMIHHLVTNFRWELAGQRDGIEHGPFPVPINGLPIRVWRLSTLN* | 109 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 18394553 | 18395146 | + | CsaV3_2G027780.1 | Csa02g01959 | 520016 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g01959 | 108 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 46 | 55 | IPR017972 | GO:0005506|GO:0016705 | |
Csa02g01959 | 108 | SUPERFAMILY | Cytochrome P450 | 1 | 101 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g01959 | 108 | PANTHER | CYTOCHROME P450 26 | 1 | 102 | - | - | |
Csa02g01959 | 108 | PRINTS | E-class P450 group I signature | 12 | 36 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g01959 | 108 | PRINTS | E-class P450 group I signature | 43 | 53 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g01959 | 108 | PRINTS | E-class P450 group I signature | 53 | 76 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g01959 | 108 | PANTHER | CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE | 1 | 102 | - | - | |
Csa02g01959 | 108 | Pfam | Cytochrome P450 | 1 | 82 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g01959 | 108 | Gene3D | Cytochrome P450 | 1 | 105 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g01959 | Csa-Chr2:18394553 | Csa04g00714 | Csa-Chr4:4840262 | 5.95E-52 | dispersed | |
Csa02g01959 | Csa-Chr2:18394553 | Csa04g02406 | Csa-Chr4:24307454 | 2.28E-60 | wgd | |
Csa02g01959 | Csa-Chr2:18394553 | Csa07g00762 | Csa-Chr7:5351643 | 2.37E-49 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g01959 | K09843 | - | csv:101220320 | 238.81 |