Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01959 TATTTAATACCAAAGGGTTGGAAAGTAATGCCTTTGTTCAGGAATATTCATCACAATCCTGACTACTTTGTTGACCCTCATAAATTTGATCCTTCAAGATTTGAGGTTGCTCCAAGACCCAATACATTCATGCCATTTGGCAGTGGCGTCCATGCCTGCCCTGGGAATGAGCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATCTAGTCACCAATTTCAGGTGGGAATTGGCAGGACAGAGAGATGGAATTGAGCATGGGCCATTTCCAGTGCCTATAAATGGACTTCCCATCAGAGTTTGGAGATTATCCACTTTAAATTAA 327 42.2 YLIPKGWKVMPLFRNIHHNPDYFVDPHKFDPSRFEVAPRPNTFMPFGSGVHACPGNELAKLEILIMIHHLVTNFRWELAGQRDGIEHGPFPVPINGLPIRVWRLSTLN* 109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18394553 18395146 + CsaV3_2G027780.1 Csa02g01959 520016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01959 108 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 46 55 IPR017972 GO:0005506|GO:0016705
Csa02g01959 108 SUPERFAMILY Cytochrome P450 1 101 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01959 108 PANTHER CYTOCHROME P450 26 1 102 - -
Csa02g01959 108 PRINTS E-class P450 group I signature 12 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01959 108 PRINTS E-class P450 group I signature 43 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01959 108 PRINTS E-class P450 group I signature 53 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01959 108 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 1 102 - -
Csa02g01959 108 Pfam Cytochrome P450 1 82 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g01959 108 Gene3D Cytochrome P450 1 105 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01959 Csa-Chr2:18394553 Csa04g00714 Csa-Chr4:4840262 5.95E-52 dispersed
Csa02g01959 Csa-Chr2:18394553 Csa04g02406 Csa-Chr4:24307454 2.28E-60 wgd
Csa02g01959 Csa-Chr2:18394553 Csa07g00762 Csa-Chr7:5351643 2.37E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01959 K09843 - csv:101220320 238.81