Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02032 ATGACCTCCGACGGCGCCACTTCTGCCTCCAATTGTCGCCGTAAGCCTTCTTGGAGGGAGCGGGAGAATAATCGGACCAGAGAGCGCCGGAGAAGAGCCATCGCTGCTAAGATTTACTCCGGCCTTAGAGCTCAGGGTAACTTCAATTTGCCTAAACACTGTGACAATAACGAGGTCCTTAAAGCCCTCTGTGCTGAAGCTGGTTGGACTGTCGAAGATGACGGAACCACTTATCGGAAGGGATGCAAGCCACCTCCCATTGATATTGTTGGCACTTCAACCAAAATCACCCCTTATTCTTCCCAAAATCCAAGCCCATTGTCTTCTTCTTTCCCCAGTCCTATGGGATCCTACCAAGTAAGTCCCTCCTCCTCCTCCTTCCCGAGCCCGTCCCGTTACGATGCCAATAATCCGTCCAATCTCATTCCTTATCTTCGCCAAGCGATTCCCATTTCGCTTCCTCCTCTTAGAATCTCAAACAGTGCTCCTGTGACCCCTCCCCTTTCATCCCCAGCCTCAAGGACTCCGCAGCCATTCCCCAATTGGGAAGTCAATGCTAAAGAATCCTTGTCCTCTTTGAATTACCCTTTCTTTGCAGTATCTGCTCCAGCTAGCCCGACCCGCCCTCAGCTCCATACTCCCGCCCCGATCCACAAATGTGATGAATCTGAATCATCTACCAATGATTCCAATCAATGGGCACTTTTCCGTGCCTATGCGCCTTCTGCATCGACAATGCCAACATCTCCCACTTTCAACCTTGTGAAACCTGCTGATCAGCATGTTCTGCATGGTGGTTTCATCCAAGAAAATGGAAGAAGAAACGAATTCGAGTTCTTGGGGTACAAGGTTAAGCCTTGGGAAGGGGAGAAAATCCACGACGTTGGATTGGAGGATTTAGAGCTCACACTTGGTAGCAGTAAGGCTCGAAGCTAA 936 50.0 MTSDGATSASNCRRKPSWRERENNRTRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWTVEDDGTTYRKGCKPPPIDIVGTSTKITPYSSQNPSPLSSSFPSPMGSYQVSPSSSSFPSPSRYDANNPSNLIPYLRQAIPISLPPLRISNSAPVTPPLSSPASRTPQPFPNWEVNAKESLSSLNYPFFAVSAPASPTRPQLHTPAPIHKCDESESSTNDSNQWALFRAYAPSASTMPTSPTFNLVKPADQHVLHGGFIQENGRRNEFEFLGYKVKPWEGEKIHDVGLEDLELTLGSSKARS* 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18745171 18747558 + CsaV3_2G028510.1 Csa02g02032 520089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02032 311 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 310 IPR033264 GO:0003700|GO:0006351|GO:0009742
Csa02g02032 311 MobiDBLite consensus disorder prediction 1 30 - -
Csa02g02032 311 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 136 IPR008540 -
Csa02g02032 311 MobiDBLite consensus disorder prediction 14 30 - -
Csa02g02032 311 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 310 - -
Csa02g02032 311 MobiDBLite consensus disorder prediction 93 132 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02032 Csa-Chr2:18745171 Csa06g03212 Csa-Chr6:27211404 4.78E-97 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30997 PF05687 BES1_N 4.40E-62 No_clan Csa TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02032 K14503 - csv:101219853 564.303