Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02073 ATGTCCTCCCTCTGCTTCTGGTGCTCTGCGGCCGTCGCCACCGCTGTTGCTCTCTCCATCCTTGTCTTTTTTCAATTCTTTCTGAAGAATAAGTCACCGTCTTCGCGGATTTCTCATGCCGGTACTCCTCCTGGAAGCAGAGGATTGCCTTTCATTGGAGAGACGCTGCAGTTCATGGCCGCTGTTAACTGTAGCAGCGGCGTTTATGATTTCGTCAGAATCCGCTGCCTCCGGTACGGGGGGTGTTTTAAGACTCGGATATTTGGGGAAACACATGTGTTTGTATCAAACACGGAATGGGCGAAGCTTATACTGAATGATGGGGGAGGAAGGTTCACTAAAAAGTATATAAAGTCCATTGTTGAGTTAGTCGGCCATCAAAGTTTACTCTGTGCTCCACATTTACACCACAAATTCTTACGAAGTCGTCTCATCAATCTTTTCTCTTCTTGCTTTTTGGCCTCTTTTGTTCCACAATTCGATCGACAAATCGTTGAGACGTTTCAAAGATGGGAGAGTGGATTCACCGTTTTCGTTCTCACGGAAGCCCTCAAGATAACATGTAAAGCAATGTGTAAGATGTTAATAAGCTTAGAGGAGGAAAACGAAGTAGAGATGATACAAAAAGACGTTGGATATGTTTGTGAAGCCATGCTTGCATTCCCATGGCGGTTTCCAGGGACAAGATTCGATGCAGGCCTCAAGGCAAGAAGGAGAATTATAAAGAAACTAAAAAACATAATTCAGAAGAGACGAGAATTAGAGTCCCAGTATGAAGATTTCCTACAACGGTTGTTGATGGAAGAAGACAACGGAGAACCACTATCAGATATGGAGATAGGAGATAATATATTGACGATGTTGATTGCAGGACAAGACACAACAGCAAGTGCTATCACTTGGATGGTGAAATTCTTGGATGAGAACCAAGATGTGCTTCAAAACCTAAAGGAGGAACAATTTAAAATATTGGAGGAACAACGAGAAGATAATAGAAGTTTTCTTACATTAGAAGATGTTGCCAACATGTCTTACGCTACCAAGGTAGTAAAAGAATCCTTGAGGTTAGCATCTATTGTTCCATGGTTGCCGAGGCTAATCCTTCACGACACTGATATTCAAGATTACAAAATCAAGAAAGGTTGGAATGTTAACATTGATGTGAGATCACTACACTCAGATCCTTCTATCTACAAAGATCCTATTAAGTTTATTCCATCCAGGTTTGATGAAGAAACAAAGGCATTTAGCTTTCTAGCCTTTGGGATGGGAGGGAGGCAGTGTCTAGGGATGAATCTAGCCAAAGCCATGATGCTTGTCTTTCTTCACCGCTTGCTTACTTCTTTCAGATGGAAAGTGATGGACTGTGACTCCAGCATTGAGAAGTGGGCGCTTTTTACCAAATTAAAGAGCGGTTGTCCAATTCTCATCACACCTCTTCAATCTTCATAA 1452 42.22 MSSLCFWCSAAVATAVALSILVFFQFFLKNKSPSSRISHAGTPPGSRGLPFIGETLQFMAAVNCSSGVYDFVRIRCLRYGGCFKTRIFGETHVFVSNTEWAKLILNDGGGRFTKKYIKSIVELVGHQSLLCAPHLHHKFLRSRLINLFSSCFLASFVPQFDRQIVETFQRWESGFTVFVLTEALKITCKAMCKMLISLEEENEVEMIQKDVGYVCEAMLAFPWRFPGTRFDAGLKARRRIIKKLKNIIQKRRELESQYEDFLQRLLMEEDNGEPLSDMEIGDNILTMLIAGQDTTASAITWMVKFLDENQDVLQNLKEEQFKILEEQREDNRSFLTLEDVANMSYATKVVKESLRLASIVPWLPRLILHDTDIQDYKIKKGWNVNIDVRSLHSDPSIYKDPIKFIPSRFDEETKAFSFLAFGMGGRQCLGMNLAKAMMLVFLHRLLTSFRWKVMDCDSSIEKWALFTKLKSGCPILITPLQSS* 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18943496 18947183 - CsaV3_2G028920.1 Csa02g02073 520130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02073 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Csa02g02073 483 Pfam Cytochrome P450 43 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 SUPERFAMILY Cytochrome P450 39 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 Gene3D Cytochrome P450 32 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 PANTHER CYTOCHROME P450 26 20 479 - -
Csa02g02073 483 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02073 483 PANTHER CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 20 479 - -
Csa02g02073 483 Coils Coil 237 271 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02073 Csa-Chr2:18943496 Csa07g01422 Csa-Chr7:14443070 4.12E-93 dispersed
Csa02g02073 Csa-Chr2:18943496 Csa06g03271 Csa-Chr6:27505791 8.64E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02073 - - csv:101215324 962.6