Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g02098 | ATGGCGGACTCGGGCTCTGCCTCCGACAAGAGAATGTCGTGCTCTATCCCTGAGAGGTTCCAACTCCATGCCGCCATGTTGGCCTTGCAATTCGGCTATGCCGGTTTCCATGTCGTCTCTAGAGCTGCCCTCAACATGGGCATTAGTAAACTCGTCTTCCCTGTTTACCGAAATGTCATCGCTTTGCTCCTCCTCCTTCCCTTTGCATATTTCATCGAAAAGAAGGATAGACCTGCTCTCACTCTCAACTTTGTCCTTCAGTTCTTCCTGCTGGCTCTCGTTGGAATTACAGCCAATCAAGGGTTTTACTTGCTGGGTTTGGATAATACTTCCCCAACCTTTGCTTCTTGTATTCAAAATTCTGTCCCTGCCATTACTTTCCTCATGGCTGCACTTCTCAGAATTGAGCAAGTACGACTGAACCGGAAAGATGGGATAGCAAAGGTGATGGGTACAATATGTTGCGTGGCCGGAGCGACGGTGATCACATTATACAAAGGGCCCACCATCTACAGCCCCTCAACAACGACGGTGACGTTGCAGGGTATGGCAGAGACGACGGCGGCAATGACGCTGCAAGGGCCGGGAATGTTCCCGTCGCTAGGCGACGCAAAGGGGAAAAGCTGGACGTTAGGGTGCGTGTACTTGATCGGCCACTGTTTGTCGTGGTCGGCGTGGCTAGTTCTTCAAGCACCGGTGCTGAAAAAGTATCCGGCTCGCCTCTCCGTCACCTCCTTCACTTGCTTCTTTGGCCTCATCCAATTCCTCATCATCGCCGTCGCCTTCGAGCGCGACGCTCAGGCTTGGCTCTTTCACTCCGGCGCTGAAGCCTTTAGCATTGTTTATGCTGGGGTGGTGGCTTCGGGGATAGCATTTGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTCTTCGTTGCTGTCTACCAACCTGTTCAGACCTTCGTTGTTGCTCTCATGGCTTCCTTCGCTTTGGGCGAGGAGTTCTACTTGGGAGGGATCATAGGGGCGGTGCTTATTATAACGGGATTGTACCTTGTGCTGTGGGGAAAGAGCGAAGAAAAGAAAATCCTATTGGAAAGATCAATGATCCAGACCGCACCGGACCATGGTAGCAGCAGAATAAGTGGCCAGATCAAACCGTCCATTACCCAGCCACTACTCCATCCTACGGCGGAAAATGTTTGA | 1191 | 51.81 | MADSGSASDKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFIEKKDRPALTLNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASCIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPSTTTVTLQGMAETTAAMTLQGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLIQFLIIAVAFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVALMASFALGEEFYLGGIIGAVLIITGLYLVLWGKSEEKKILLERSMIQTAPDHGSSRISGQIKPSITQPLLHPTAENV* | 397 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 19067121 | 19071171 | - | CsaV3_2G029170.1 | Csa02g02098 | 520155 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g02098 | 396 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 255 | 353 | - | - | |
Csa02g02098 | 396 | Pfam | EamA-like transporter family | 26 | 163 | IPR000620 | GO:0016020|GO:0016021 | |
Csa02g02098 | 396 | Pfam | EamA-like transporter family | 211 | 349 | IPR000620 | GO:0016020|GO:0016021 | |
Csa02g02098 | 396 | PANTHER | WAT1-RELATED PROTEIN | 14 | 371 | IPR030184 | GO:0016021|GO:0022857 | |
Csa02g02098 | 396 | PANTHER | WAT1-RELATED PROTEIN | 14 | 371 | - | - | |
Csa02g02098 | 396 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 56 | 166 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Csa02g02098 | Csa03g04250 | CCT | |
Csa02g02098 | Csa03g04250 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g02098 | Csa-Chr2:19067121 | Csa03g03689 | Csa-Chr3:32827816 | 1.13E-80 | dispersed | |
Csa05g02915 | Csa-Chr5:29627127 | Csa02g02098 | Csa-Chr2:19067121 | 1.00E-50 | dispersed | |
Csa01g00409 | Csa-Chr1:2564011 | Csa02g02098 | Csa-Chr2:19067121 | 1.31E-141 | transposed | |
Csa01g02638 | Csa-Chr1:23362280 | Csa02g02098 | Csa-Chr2:19067121 | 1.69E-74 | transposed | |
Csa02g00519 | Csa-Chr2:3652692 | Csa02g02098 | Csa-Chr2:19067121 | 3.05E-65 | transposed | |
Csa04g01773 | Csa-Chr4:17392489 | Csa02g02098 | Csa-Chr2:19067121 | 6.34E-75 | transposed | |
Csa05g00146 | Csa-Chr5:801108 | Csa02g02098 | Csa-Chr2:19067121 | 1.47E-71 | transposed | |
Csa02g02098 | Csa-Chr2:19067121 | Csa03g04250 | Csa-Chr3:37232371 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g02098 | - | - | csv:101210562 | 782.711 |