Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02142 ATGGGATTTCTTCAAACCCATTTTGTTTCTTCTTCCTCTGTTTTGTTTCACTCTCTGTTTTTGATCATCTTCTTTAAAGGCGTCTCTGGAGCTGGCTTTACATTTGTAAATCGATGCGATTTCACTATTTGGCCGGGAATTCTTGGCAACCCAAAATTGGAATCCACTGGGTTCGAGCTATCTCCGGGTGCGGTGCGTTCATTTCAAGCCCCGCCTGGTTGGTCTGGCAGGTTCTGGGGTCGTACCGGCTGTTCGTTTGACCCAGCCACTGGTCAGGGCAATTGTCAAACGGCTGATTGTGGATCAAACCAAATAGAATGCAATGGCGCCGGAGCTACTCCGCCGGCGACTCTAGCCGAGTTTACGATCGGCGGAGGTGCCGGTGGGCAGGACTTTTACGATGTCAGTTTGGTTGACGGTTACAACATTCCGATGGTGGTCGATGCCACTGGTGGGAGCGGCGCATGTCAGTCGACTGGGTGCGCGGCGGAGCTGAATCGACGGTGCCCGTCGGAGCTACGCGCTGGGGAAGGAAAGGCGTGTAGGAGCGCGTGTGAGGCGTTTGGGAACCCAGAATACTGCTGTAGCGGCGCGTATAACTCACCCGCCGCTTGTAAACCATCGATTTACTCGGAAATGTTCAAATCGGCTTGCCCTAAATCGTATAGCTATGCGTTTGATGACGCAACAAGCACTTTTACTTGTAGTGGAGCAGATTACACCATTACATTCTGCCCTTCTTCCGCAAGCCAAAAATCAGAAAGAGACCCGTCAAGCCGAGGCGACAGGCCATTTGTATCGTTTGACAGTTCATGGCTGCCGGACTTTATCACCGGAGAAGGATCATCCAAAACAATCCTTTTGTCTTCAACTTTGAATTCAACATTGTTTTTTCTTCTTTCTTTCACTCTCTTTTTTCATTAG 924 50.0 MGFLQTHFVSSSSVLFHSLFLIIFFKGVSGAGFTFVNRCDFTIWPGILGNPKLESTGFELSPGAVRSFQAPPGWSGRFWGRTGCSFDPATGQGNCQTADCGSNQIECNGAGATPPATLAEFTIGGGAGGQDFYDVSLVDGYNIPMVVDATGGSGACQSTGCAAELNRRCPSELRAGEGKACRSACEAFGNPEYCCSGAYNSPAACKPSIYSEMFKSACPKSYSYAFDDATSTFTCSGADYTITFCPSSASQKSERDPSSRGDRPFVSFDSSWLPDFITGEGSSKTILLSSTLNSTLFFLLSFTLFFH* 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19383919 19386764 + CsaV3_2G029610.1 Csa02g02142 520199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02142 307 CDD TLP-PA 33 245 - -
Csa02g02142 307 Pfam Thaumatin family 37 246 IPR001938 -
Csa02g02142 307 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Csa02g02142 307 PRINTS Pathogenesis-related protein signature 56 65 IPR001938 -
Csa02g02142 307 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Csa02g02142 307 PRINTS Pathogenesis-related protein signature 131 147 IPR001938 -
Csa02g02142 307 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Csa02g02142 307 PANTHER OS03G0233200 PROTEIN 10 263 IPR001938 -
Csa02g02142 307 SMART tha2 33 246 IPR001938 -
Csa02g02142 307 ProSiteProfiles Thaumatin family profile. 30 246 IPR001938 -
Csa02g02142 307 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 10 263 - -
Csa02g02142 307 SUPERFAMILY Osmotin, thaumatin-like protein 33 247 IPR037176 -
Csa02g02142 307 Gene3D Thaumatin 31 246 IPR037176 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa02g02142 Csa03g04288 CCT
Csa02g02142 Csa03g04288 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02142 Csa-Chr2:19383919 Csa06g03334 Csa-Chr6:27860378 8.35E-124 dispersed
Csa06g03333 Csa-Chr6:27851431 Csa02g02142 Csa-Chr2:19383919 2.55E-85 dispersed
Csa02g02140 Csa-Chr2:19375453 Csa02g02142 Csa-Chr2:19383919 1.18E-98 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02142 - - csv:101204331 587.415