Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02163 ATGGCTGCCGCTCCTTCTGTTCGTGAGGAGAATGTTTACATGGCTAAGCTTGCCGAGCAGGCTGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTTTCCGCTTCTCTTGACAAGGAGGAACTCACCGTCGAGGAGAGAAACCTCCTTTCTGTCGCTTACAAGAACGTCATCGGTGCTCGTAGGGCCTCCTGGCGTATCATTTCCTCCATCGAACAGAAGGAGGAGAGCCGAGGTAACGATGACCATGTCTCTGTGATCCGTGACTACAGATCCAAAATTGAGACCGAACTCTCCAATATTTGCGATGGAATCCTTAAGCTTCTTGATTCTAGACTCATTCCCTCCGCTGCTTCCGGAGATTCCAAGGTTTTTTACCTCAAAATGAAGGGCGATTACCATAGATACCTTGCCGAGTTCAAAACCGGAGCCGAACGCAAGGAAGCTGCTGAAAGCACTCTTACTGCTTACAAAGCCGCTCAGGATATTGCAAATTCTGAGTTGCCTCCTACACATCCGATCCGACTTGGATTGGCACTTAACTTCTCTGTATTCTATTATGAAATTTTGAATTCCCCTGATCGTGCCTGCAGTCTTGCGAAACAGGCATTTGATGAAGCTATCGCCGAGTTGGATACCCTTGGAGAGGAATCCTACAAAGATAGTACTTTGATCATGCAGCTTCTTCGGGATAATCTCACTCTCTGGACATCGGACATGCAGGATGATGGAGCTGATGAGATTAAAGAAGCTCCACCGAAGCGTGAGGATGAAAAGCAGTGA 786 48.09 MAAAPSVREENVYMAKLAEQAERYEEMVEFMEKVSASLDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIETELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANSELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREDEKQ* 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19525778 19528220 + CsaV3_2G029820.1 Csa02g02163 520220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02163 261 MobiDBLite consensus disorder prediction 242 261 - -
Csa02g02163 261 Gene3D - 2 251 IPR036815 -
Csa02g02163 261 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 5 253 - -
Csa02g02163 261 SMART 1433_4 8 251 IPR023410 -
Csa02g02163 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Csa02g02163 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Csa02g02163 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Csa02g02163 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Csa02g02163 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Csa02g02163 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Csa02g02163 261 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Csa02g02163 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Csa02g02163 261 PIRSF 14-3-3 2 250 IPR000308 -
Csa02g02163 261 Coils Coil 14 41 - -
Csa02g02163 261 PANTHER 14-3-3 PROTEIN 5 253 IPR000308 -
Csa02g02163 261 MobiDBLite consensus disorder prediction 243 261 - -
Csa02g02163 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Csa02g02163 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa02g02163 Csa03g04457 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02163 Csa-Chr2:19525778 Csa05g02506 Csa-Chr5:26677086 4.28E-129 dispersed
Csa03g04481 Csa-Chr3:39056155 Csa02g02163 Csa-Chr2:19525778 4.89E-136 transposed
Csa04g00880 Csa-Chr4:6317654 Csa02g02163 Csa-Chr2:19525778 7.24E-164 transposed
Csa02g02225 Csa-Chr2:19987096 Csa02g02163 Csa-Chr2:19525778 3.25E-135 transposed
Csa02g02163 Csa-Chr2:19525778 Csa03g04457 Csa-Chr3:38853484 1.82E-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02163 K06630 - csv:101220164 509.99