Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02225 ATGGCCGCCGCCGTGCCGGAAAATCTGTCTCGCGAGCAATACGTGTACCTAGCGAAGCTTGCTGAGCAGGCGGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACACCCGGCTCAGAGCTATCTGTTGAGGAGCGAAATCTTCTCTCTGTGGCTTACAAGAACGTGATTGGGTCACTTCGAGCTGCTTGGCGGATTGTTTCTTCCATCGAGCAAAAGGAGGAGAGTCGTAAGAATGAAGAGCATGTTGTGCTTGTTAAAGATTATAGATCAAAGGTTGAGTCTGAGCTTTCCGATGTCTGCGCGAGTATTTTGCAGCTTTTGGACTCGAATCTTATTCCATCTGCCTCTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAAGGGGATTACCATAGGTATTTGGCGGAGTTTAAGGTTGGAGATGAGAGGAAAGCTGCTGCTGAGGATACTATGCTGGCTTATAGGGCTGCTCAGGACGTCGCAGTTGCGGATCTTGCTCCCACTCATCCGATAAGGCTGGGGCTGGCACTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTAGCATGGCCAAGGAGGCATTTGAGGAAGCCATTGCTGAGCTGGACACTCTGGGTGAAGAATCATACAAGGACAGTACCCTCATCATGCAACTATTGAGGGACAACCTCACTCTCTGGACTTCAGATGCGCAGGACCAGTTAGATGAGTCATAG 759 48.22 MAAAVPENLSREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSKVESELSDVCASILQLLDSNLIPSASASESKVFYLKMKGDYHRYLAEFKVGDERKAAAEDTMLAYRAAQDVAVADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDES* 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19987096 19991409 + CsaV3_2G030440.1 Csa02g02225 520282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02225 252 PANTHER 14-3-3 PROTEIN 8 248 IPR000308 -
Csa02g02225 252 Coils Coil 17 37 - -
Csa02g02225 252 Gene3D - 1 252 IPR036815 -
Csa02g02225 252 PANTHER BNAC02G00320D PROTEIN 8 248 - -
Csa02g02225 252 PIRSF 14-3-3 6 252 IPR000308 -
Csa02g02225 252 Pfam 14-3-3 protein 17 242 IPR023410 -
Csa02g02225 252 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Csa02g02225 252 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Csa02g02225 252 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Csa02g02225 252 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Csa02g02225 252 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Csa02g02225 252 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Csa02g02225 252 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
Csa02g02225 252 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Csa02g02225 252 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Csa02g02225 252 SMART 1433_4 11 251 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02225 Csa-Chr2:19987096 Csa03g04481 Csa-Chr3:39056155 3.70E-171 dispersed
Csa02g02225 Csa-Chr2:19987096 Csa03g04457 Csa-Chr3:38853484 4.95E-135 transposed
Csa02g02225 Csa-Chr2:19987096 Csa02g02163 Csa-Chr2:19525778 3.25E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02225 K06630 - csv:101222827 484.567