Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02310 ATGTGGAATCAGAAGCAATCCATTGGTAAGGAAAGGAAAGAGCTATCCACTGCCAATCAATTGGTGGGTATTGCCATTGATAAGGATAAAGGAAGTCAACTTGCTCTTAAATGGGCCACTGAGAATCTCCTTGTAAAAGGCCAAACTGCCATTCTCATCCATGTTAAACTCAAATCTTCCACTTATCCTGGCTCTTCCATGGCTTCCCCTAAGGTGATGTCGGCGTCTGACGCCGGCAATGTCAATGGCAATGTTTTGGTAAGCAAGGACATCGATCCGATCACAAGGGATTTGTTCCTTCCTTTTCGCTGCTTCTGTACGCGTAAAGATATATTTTGCAAAGACATCGTTGTTGAAGATTTAGATGTTGCAAAAGCGTTGATCGAATATGTCACTCAGGCTGGAATTGAGAATTTGGTCGTCGGTTCCACATCTAAAAATAGCTTCTTGAGATTGAAGACAACAGATATTCCAGGCAGTGTTGTCAAAGGAGCACCAGATTTCTGCAATGTTTATGTCATATCAAGATCGAAAATCCAAACTATCCGATCAGCCTCACGTCCTGCTCCGGTTTCATCTCCTCTTCGAAGTTTATTGCTGAGCCAAACTGTTGTCAAATCACATTCAGCTGAGTCACTAGTTCCTCAGATTCAAACTACGAGACCTGAAAAGCCTCCCCTTGAAGCAGCACGTAGATCTCAGGACAACATCGAGTTCAGGTCGCCGTTCACTAGGAAAGGCTACAATGGAAAAATGCCAGGGGAAGTCTCTCTGCCAGATACTGATATTTCTTTCGTTAGCTCGGGAAGGCCGAGTGTTGACCGATTATTCCCTACATTGTTTGACAATGTGGATACTGGAAGGGTTCCCCCACGACTGTCCAGTGGCAATGATGCTGAACTATATAATAGCTTTGAGTCACAACAATTTGGACGCAAATCAGTGGATGGACGCAAATCAGTGGATGGACGAAAATCAGTGGATGGACGCAAATCAGTGGATGTCAACTATCCACCTGAATTTTTATCGGTTTTCTCAGAAAGTGACAGATTGTCAACTTCCTCACAGAGTATGGAAGAAGTAGAGGCTGAAATGAGGAGGCTGAAGTTGGAACTAAAGCAAACCATGGAAATGTATAGCACAGCCTGCAAGGAAGCACTAACAGCCAAACAAAAGGCAGTAGAGCTTCAGCGATGGAAATCTGAGGAGGAACGAAGAATAGAGGAGGCAAGATTCGCAGAGGAAGCTGCTTTAGCGATGGTTGAGCAGGAAAAGGCAAAATCTAGAGCTGCTATTGAGGCTGCTGAGGCAGCTAAAAGGATCGCTGAGTTGGAATCACAGAAGAGAATTAATGCAGAAAAAAAAGCATTCAAGGAAGCAGAAGAGAAGAAGAAGGCATTAGATGCTTTGGCTAACAATGATGTCAGGTATCGAAAGTACTCGATCGAAGAGATTGAAACTGCTACCGAGTTCTTTTCAGAATCTTTAAAGATCGGAGAGGGAGGCTATGGGCCTGTTTATAAAGGTTATTTGGACCACACACCAGTTGCAATTAAGGTCTTACGTCCGGATGCGGCTCAAGGGAGGTCACAGTTCCAGCAAGAGGTCGAAGTACTAAGCTGCATACGACATCCTAACATGGTTCTTCTCCTTGGAGCCTGCCCCGAATATGGCTGCTTGGTCTATGAGTTCATGGCACATGGGAGCTTGGATGATTGCCTCTTTCGCCGGGGACAAAATTCGAAACCTCTTTCTTGGCAGCGTAGATTTAAAATTGCAGCTGAAATTGGCACTGCGTTGTTGTTCCTCCATCAGACTAAACCTGAGCCTCTTGTGCATCGTGATTTGAAACCGGCCAACATCTTGCTCGATCGTAATTACGTTAGCAAGATTAGCGATGTTGGTTTGGCCAGGCTTGTTCCCCCATCTGTAGCAAACAGTGTGACACAATATAGAATGACTTCAACTGCTGGCACATTCTGTTACATCGATCCCGAGTATCAACAAACCGGCATGCTGGGTGTAAAGTCCGACATTTATTCTTTGGGAATAATGTTTTTGCAGATGATTACAGCAAGGGCACCCATGGGATTGACTCACCATGTGGGAAGAGCTATTGAGAAAGGGAATTTGTCCGAAATTCTTGATCCATCCGTTACCGATTGGCCAGCTGAAGAAACATTGTGCTTTGCTGAGTTGGCTTTAAAATGTGCAGAGTTGAGAAGGAAAGATCGACCAGATCTTGGTAAGGTTGTTCTCCCAGAACTCATCAGATTTCAATCAGTAGCCGAAACCAGCATATTCGTTCCGCGGATGGACAGTGTTAACAGTCCTGAGTTCAGCAGCAGTCAGGCTTCTATGAGAAGAGACAGCGATTGTTTTTCCTCGCAATCTAACGATAGCTTTGAAGTCCTATCGCGCTCGGAGTCGTAG 2433 44.84 MWNQKQSIGKERKELSTANQLVGIAIDKDKGSQLALKWATENLLVKGQTAILIHVKLKSSTYPGSSMASPKVMSASDAGNVNGNVLVSKDIDPITRDLFLPFRCFCTRKDIFCKDIVVEDLDVAKALIEYVTQAGIENLVVGSTSKNSFLRLKTTDIPGSVVKGAPDFCNVYVISRSKIQTIRSASRPAPVSSPLRSLLLSQTVVKSHSAESLVPQIQTTRPEKPPLEAARRSQDNIEFRSPFTRKGYNGKMPGEVSLPDTDISFVSSGRPSVDRLFPTLFDNVDTGRVPPRLSSGNDAELYNSFESQQFGRKSVDGRKSVDGRKSVDGRKSVDVNYPPEFLSVFSESDRLSTSSQSMEEVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKSEEERRIEEARFAEEAALAMVEQEKAKSRAAIEAAEAAKRIAELESQKRINAEKKAFKEAEEKKKALDALANNDVRYRKYSIEEIETATEFFSESLKIGEGGYGPVYKGYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMAHGSLDDCLFRRGQNSKPLSWQRRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVANSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQMITARAPMGLTHHVGRAIEKGNLSEILDPSVTDWPAEETLCFAELALKCAELRRKDRPDLGKVVLPELIRFQSVAETSIFVPRMDSVNSPEFSSSQASMRRDSDCFSSQSNDSFEVLSRSES* 811
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20598002 20602959 + CsaV3_2G031290.1 Csa02g02310 520367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02310 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Csa02g02310 810 Coils Coil 450 473 - -
Csa02g02310 810 Pfam Universal stress protein family 22 166 IPR006016 -
Csa02g02310 810 Gene3D Phosphorylase Kinase; domain 1 470 564 - -
Csa02g02310 810 Gene3D Transferase(Phosphotransferase) domain 1 565 766 - -
Csa02g02310 810 MobiDBLite consensus disorder prediction 313 331 - -
Csa02g02310 810 PANTHER OS02G0152300 PROTEIN 13 802 - -
Csa02g02310 810 Gene3D HUPs 21 174 IPR014729 -
Csa02g02310 810 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 13 802 - -
Csa02g02310 810 CDD STK_N 21 176 - -
Csa02g02310 810 ProSiteProfiles Protein kinase domain profile. 492 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa02g02310 810 Coils Coil 418 447 - -
Csa02g02310 810 SUPERFAMILY Protein kinase-like (PK-like) 476 752 IPR011009 -
Csa02g02310 810 MobiDBLite consensus disorder prediction 776 810 - -
Csa02g02310 810 SMART serkin_6 492 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa02g02310 810 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 24 174 - -
Csa02g02310 810 Coils Coil 351 378 - -
Csa02g02310 810 MobiDBLite consensus disorder prediction 313 332 - -
Csa02g02310 810 Pfam Protein kinase domain 494 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00700 Csa-Chr2:5664089 Csa02g02310 Csa-Chr2:20598002 0 dispersed
Csa02g02310 Csa-Chr2:20598002 Csa07g00067 Csa-Chr7:683039 0 dispersed
Csa02g02310 Csa-Chr2:20598002 Csa03g04417 Csa-Chr3:38540278 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77927 PF00069 Pkinase 9.90E-39 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02310 - - csv:101214468 1497.64