Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02314 ATGACGGCACCGGTGTCCGTTGATGGGAAAGGGAAGAAGAATATTGAGAATTTGGTGTCTGCTACTAGGTCATTGAAGGCTAGCTTAGAGAAATCTAGGACTTTAGGGTTTTCTTTGCAGAAAGCTGGGCCGAGATTGGAGGAGATTAGGCAAAGATTGCCGACTTTAGAAGCGGCGGTTCGGCCTATTCGTGCTGATAAGGAAGCCCTTGTTGCCGTCGGTGGCCATATAAATCGGGCTGTTGGCCCTGCCGCGGCCGTGCTTAAGGTTTTCGATGCAGTTCATGGCCTTGAAAAATCTCTATTATCGGACCCGCGGAATGATCTTCATGGGTATTTGTCTGTGTTGAAACGTATGGAAGAGGCATTGAGGTTTTTGGGAGATAACTGTGGACTGGCAATCCAGTGGTTGGAGGACATTGTTGAGTATTTGGAAGATAATACTGTTGCTGATGAGAAATATCTAGCGAGTTTGAAGAATTCGTTGAAAAATCTTAGGGATTTGCAGAGTGATGAAGGGAGGACTCGGCTTGATGGGGGCCTTCTGAATGCTGCTTTAGATAAACTCGAGAACGAGTTTAGGCGGCTTTTGACGGAGCACAGTGTACCTCTTCCAATGTCTTCTTCGGCGTCTCCAGGTGAGCAAGCTTGCATTGCTCCATCCCCATTGCCTGTCACTATCATTCCGAAATTGCAAGCCATTCTTGGGAGATTGATTGCTAATAAACGACTCGAGAGTTGCATATCGATTTATGTTGAAGTTCGTAGTTCTAATGTTAGGGCTAGTTTGCAGGCTCTTGATTTGGATTACTTGGAGATATCTGTTTCTGAGTTCAATGATGTGCTGAGCATCGAAGGGTACATTGCAAAATGGGGAAAGCATTTGGAGTTTGCAGTGAAACACTTGTTTGAGGCCGAGTTCAAGCTTTGTAATGACGTTTTTGAGAGGATTGGATTGGATGTTTGGATGGGGTGTTTTGCAAAGATAGCAACTCAAGCAGGTATTCTTGCATTTCTTCAATTTGGGAAAACTGTAACAGAAAGTAAGAATGATCCTATTAAGCTACTGAAGTTGTTGGATATATTTGCATCCTTGAACAAACTGAGACTAGACTTCAATAGGCTTTTTGGCGGGGCGGCCTGTTTGGAAATTCAAAACTTGACTAGGGATCTCATTAAGCGGGTTATTGATGGTGCGGCCGAGATTTTCTGGGAACTTTTAGTTCAGGTGGAGCTGCAGAGGCAAAATTCTCCACCTTTAGATGGGGGAGTTCCACGATCGGTTAGCTTCATTATTGATTACAGTAACAAACTACTCAGTGACGATTATCGGCCGATCTTGACCCAGGCCCTTGTCATTCACCGAAGTTGGAAGAAAGAAAAGTTCCAAGAGGGTCTACTTGTCAGTGAGGTAACGAACCTTGTTAAAGCTATTGAGCATAATCTTGAAACTTGGATAAAGGCTTATGAAGATTCTACCTTGTCAAACTTTTTTGCAATGAACAATCATTGGCATCTATACAAGCACCTCAAAGGAACAAAAGTCGGAGAACTAATGGGAGATAAACTAAAGGAACATGAACAATACAAGGATTACTATGCTGCAGTTTTCTTGAGGGAGAGCTGGACTAAACTTCCTAGCCATTTAAGCAGAGAGGGTTTGATAATGTTCTCGGGTGGCCGAGCTACTGCTCGTGATCTCGTCAAGAAACGTCTGAAGACATTCAATGAAGCTTTTGAAGACATGTATAAGAAGCAGTCAAACTGGGTTATGACTGACAAAGAGTTGAGGGAGAAGACATGTCAACTTATAGTTCAAACCATCGTACCCGTTTATCGCAGTTACATGCAGAATTACGGCCCCTTGGTCGAGCAAGACCCGAGTTCCAGTAAGTATGTGAAGTACACCGTGCAGAATCTGGAGAAAATGTTACTGTCCCTATTTCAGCCAAAGCCACTTAGGTACAGTAGTCTTAAAGTTAGGCAGACAAGTGGGAAATTCAGCAATGGCGCAGCAGATCATCGTCGTTCCAACTCCATGGTTATGTAA 2049 43.73 MTAPVSVDGKGKKNIENLVSATRSLKASLEKSRTLGFSLQKAGPRLEEIRQRLPTLEAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLHGYLSVLKRMEEALRFLGDNCGLAIQWLEDIVEYLEDNTVADEKYLASLKNSLKNLRDLQSDEGRTRLDGGLLNAALDKLENEFRRLLTEHSVPLPMSSSASPGEQACIAPSPLPVTIIPKLQAILGRLIANKRLESCISIYVEVRSSNVRASLQALDLDYLEISVSEFNDVLSIEGYIAKWGKHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKIATQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGAACLEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRQNSPPLDGGVPRSVSFIIDYSNKLLSDDYRPILTQALVIHRSWKKEKFQEGLLVSEVTNLVKAIEHNLETWIKAYEDSTLSNFFAMNNHWHLYKHLKGTKVGELMGDKLKEHEQYKDYYAAVFLRESWTKLPSHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSNWVMTDKELREKTCQLIVQTIVPVYRSYMQNYGPLVEQDPSSSKYVKYTVQNLEKMLLSLFQPKPLRYSSLKVRQTSGKFSNGAADHRRSNSMVM* 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20615961 20620621 + CsaV3_2G031330.1 Csa02g02314 520371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02314 682 SUPERFAMILY Cullin repeat-like 87 648 IPR016159 -
Csa02g02314 682 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 671 IPR004140 GO:0000145|GO:0006887
Csa02g02314 682 Gene3D Exocyst complex component Exo70 137 655 - -
Csa02g02314 682 Pfam Exo70 exocyst complex subunit 290 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
Csa02g02314 682 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 14 671 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01886 Csa-Chr2:17907653 Csa02g02314 Csa-Chr2:20615961 2.89E-70 dispersed
Csa02g02314 Csa-Chr2:20615961 Csa07g02292 Csa-Chr7:21327491 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02314 K07195 - csv:101207478 1343.56