Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02340 ATGGCCTCGCAAAACCGCCCGGCCTCAACCCTTGAAACCATCGAAAACCAGTCGGAAACCAGTAAATCGATGTCAATAAGCAGTATACCGGGAACAGTAATGAAAAAGCTGAAAACCAATCTGGTATTCCAGTCAAAATGGGCTGAATTAAACGGTGCAATGGGCGATTTAGGGACATATATTCCCATAGTTTTAGCTCTGACATTATCCAGAAACATCAATTTAGGTACCACATTAATTTTCACCGGAATTTACAACATCATCACCGGCCTGATTTACGGCGTTCCGATGCCGGTCCAGCCAATGAAATCGATCGCTGCCGCAGCCCTGGCTGATCCAGAGTTCGGCGTGGCAGAGATCATGGCGGCCGGAATCCTGACCGGTGGAATCCTGTTTGTTCTGGGTGCGACGGGGCTTATGCATTTGGTTTACAAATTGATTCCGTTGGCGGTGGTGAGAGGGATTCAATTGGCGCAAGGATTGTCGTTTACTCTGACGGCCGTTAAATATGTTCGTTATGATCAAAATATGGCGAAATCTAAATCTGGCGACGCCCGTGAATGGTTTGGATTAGATGGGTTGATTTTGGCCGTTGTTTGTGCTTGTTTTGTGATTGTCGTTAATGGCGCCGGAGAAGATGAACATCAGCCGGAAGGAACTGAAAATGAGGCCCAAGGGGAAGCAAAAGGAGGAATTAATAAAGAGAAGGTTAGGAAGATCATAGCTTCGCTTCCATCAGCTTTCATAATTTTTTGTTTAGGCATTATTTTTCTCTTCATCCGAAATCCAAAAGTGGTGAAGGAAATTACATTTGGGCCCTCATCCATCACCATTGTGAAGATCACAAAAAGCCAATGGAAAAAAGGGTTCATAAAGGGAACAATTCCCCAGCTTCCTCTCTCCATTCTCAACTCAGTTATCGCCGTTTGCAAGCTTTCCATGGATCTTTTTCCGGCCAAGATTTTCACCGTCACGTCCCTCTCTGTCACCGTCGGGCTTATGAACATCATCGGTTGCTGGTTCGGCGCCATCCCTACTTGTCATGGCGCTGGTGGTCTTGCCGGTCAGTATAAGTTCGGCGGTAGAAGCGGCGGGTGCGTCGCATTGCTCGGTGCCGCTAAATTGATGCTCGGTTTGGTTCTTGGAAGCTCTCTTGCAAAGGTTCTAAACCAATTTCCCGTAGGGATTTTGGGAGTTCTATTGTTGTTCGCTGGAGTTGAACTAGCGATGGCGGCAAGGGACATGAACACTAAAGAACAGGCGTTTGTGATGTTATTGTGCACTGGGGTTTCGTTGGTTGGCTCGAGCGCTGCACTAGGAAACGTAGCTCCCTTCTTGAGAGTTGAATCTAACTCTTCTGATGTGATCGTTGCTCTTAATGGCAACGATGAGCTTCAGCTTACTGCGTTGAAGATGGCTGTCAAAACAGCTCATTCATTTAGAGATCGGACGCTGGAATTTCAGAACATAACAGAGAGGCTAAAGAAGTCTTTCTCATCTGGTACGGGAACAACTGGACCAAGTGCTGTTTCAAAATCAGAAGAGCAGCGCTCTGCTGTGGCCCTACAGTCTGAATTTAATAAAAGGGCTTCCAAGATTGGGTTAGGGATACACCAGACCTCTCAGAAACTCTCAAAGTTGGCAAAATTGGCAAAGAGGACTTCTGTTTTTGATGACCCAACAATGGAAATTCAGGAGCTAACTGCTCTTATTAAGCAGGACATTACGACATTGAACTCTGCCGTTGTAGATCTTCAGCTTCTCTGCAACTCTAGAAATGAAAATGGAAACATATCCAGTGATACTACTAGTCATTCAACCACTGTGGTAGATGATCTTAAGAATCGACTGATGAGCACGACAAAAGAATTTAAAGAAGTCCTAACCATGCGAACTGAAAATTTGAAGGTTCATGAGAACAGAAGACAACTATTTTCTTCTACTGCTTCAAAGGAATCTACAAATCCTTTTGTTCGCCAGCGCCCATTAGCATCCAGGTCAGCTTCTGGTGCCCCAAGTGCAGCCCCTCCTCCATGGGCCAAGGCGTCTACATCTTTTTCCAAAGCATCTCCCGGGAAGCAGGTGGATGGGGAGGGTCAACCATTGTTGCAGCAGCAGCAGCAACAGCAGCAGATGGTTCCATTACAAGATACTTACATGCAGAGCAGAGCTGAAGCTCTTCAAAATGTAGAATCCACCATTCATGAATTGAGCAATATCTTCAACCAGCTGGCAACTCTGGTTTCTGAACAAGGAGAGATTGCTATTAGGATCGATGAGAACATGGACGATACTCTGGCAAATGTGGAGGGGGCACAGGGAGCTTTGCTCAAGTATCTAAGCAGTATATCATCGAATAGATGGTTGATGATCAAAATTTTCTTTGTACTAATATTCTTCCTCATGGTTTTCCTATTTTTTGTGGCATAG 2430 45.39 MASQNRPASTLETIENQSETSKSMSISSIPGTVMKKLKTNLVFQSKWAELNGAMGDLGTYIPIVLALTLSRNINLGTTLIFTGIYNIITGLIYGVPMPVQPMKSIAAAALADPEFGVAEIMAAGILTGGILFVLGATGLMHLVYKLIPLAVVRGIQLAQGLSFTLTAVKYVRYDQNMAKSKSGDAREWFGLDGLILAVVCACFVIVVNGAGEDEHQPEGTENEAQGEAKGGINKEKVRKIIASLPSAFIIFCLGIIFLFIRNPKVVKEITFGPSSITIVKITKSQWKKGFIKGTIPQLPLSILNSVIAVCKLSMDLFPAKIFTVTSLSVTVGLMNIIGCWFGAIPTCHGAGGLAGQYKFGGRSGGCVALLGAAKLMLGLVLGSSLAKVLNQFPVGILGVLLLFAGVELAMAARDMNTKEQAFVMLLCTGVSLVGSSAALGNVAPFLRVESNSSDVIVALNGNDELQLTALKMAVKTAHSFRDRTLEFQNITERLKKSFSSGTGTTGPSAVSKSEEQRSAVALQSEFNKRASKIGLGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTALIKQDITTLNSAVVDLQLLCNSRNENGNISSDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTASKESTNPFVRQRPLASRSASGAPSAAPPPWAKASTSFSKASPGKQVDGEGQPLLQQQQQQQQMVPLQDTYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEIAIRIDENMDDTLANVEGAQGALLKYLSSISSNRWLMIKIFFVLIFFLMVFLFFVA* 810
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20795533 20806363 + CsaV3_2G031590.1 Csa02g02340 520397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02340 809 Pfam Molybdate transporter of MFS superfamily 290 408 IPR031563 GO:0015098|GO:0015689
Csa02g02340 809 Pfam Molybdate transporter of MFS superfamily 48 163 IPR031563 GO:0015098|GO:0015689
Csa02g02340 809 PANTHER MOLYBDATE TRANSPORTER 1/2-RELATED 27 442 - -
Csa02g02340 809 MobiDBLite consensus disorder prediction 1 23 - -
Csa02g02340 809 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 477 496 IPR021538 -
Csa02g02340 809 Gene3D - 521 772 - -
Csa02g02340 809 MobiDBLite consensus disorder prediction 497 516 - -
Csa02g02340 809 ProSitePatterns Syntaxin / epimorphin family signature. 723 762 IPR006012 GO:0005484|GO:0006886|GO:0016020
Csa02g02340 809 MobiDBLite consensus disorder prediction 641 662 - -
Csa02g02340 809 PANTHER - 27 442 IPR031563 GO:0015098|GO:0015689
Csa02g02340 809 SMART tSNARE_6 712 779 IPR000727 -
Csa02g02340 809 CDD SNARE_syntaxin5 720 798 - -
Csa02g02340 809 MobiDBLite consensus disorder prediction 639 710 - -
Csa02g02340 809 SUPERFAMILY t-snare proteins 523 772 IPR010989 GO:0016020|GO:0016192
Csa02g02340 809 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 717 779 IPR000727 -
Csa02g02340 809 Pfam SNARE domain 753 805 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02340 Csa-Chr2:20795533 Csa07g02193 Csa-Chr7:20655219 6.70E-163 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02340 - - csv:101212057 839.336