Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02343 ATGGACGTTCCCTCAGTGGAACTAAATTGTGATAGTGAAGGAGACTCTTACCCTTTATTAATGGCACGACCTGAACATTCTAACAGCAGTGAGCATATCATTGACATAACTGGTGCTGGTGATTCTGGCCCCTCTGGTCTGCCACATGGTAGGAGTTCAAATGGCTTAAATTCATCGCAGCCTGAAGATAGACCTTCAAGTAGTACACGAGTTCCCTTGTCCCAACCCTCAACTTCTTCTACTGGATCAAATTCTAGAAATTCTTCATTCATAAGAAGAGGAGATGCACGACGTCGTAGAAGTCCATTAAATTCTGGCTTATGGATATCTATTGAATTACTACTCACTATGAGCCAGATTATTGCAGCGATTATTGTCTTATCATTGTCAAAGAATGAAAAACCCCGTGCCCCTTTGTTTGCATGGATTGTGGGATATGCATCCGGATGTGGTGCCACCCTTCCTCTTCTATACTGGCGTTATCGACACCGCAATCAGGCTTCAGAACAAGATTCTCTTCAGTCCAGCCAGAGTTCTTCTCGCATTAATGTTCCTGCTGGGCCATTCTCTCTTTCAGTTTCTAGGGCATCAGAAGGGGAAGAACTTCAGCATCCTGCCCCATCTCCTAGAGGCAGTCAAGGGTCAGGAGTACTATCAGCAAGATTAAAAGTACTGGTTGAATATTTTAAGATGGGTCTGGATTGCTTCTTTGCTGTTTGGTTTGTAGTTGGTAACGTATGGATCTTTGGAGGGCATTCATCAGCCTCTGAGGCTCCTAACTTGTACAGGCTATGTATAGTGTTTCTTACCTTCAGCTGTATTGGTTATGCAATGCCTTTCATTCTATGTGTAACCATCTGCTGTTGTCTTCCTTGTATAATTTCCATCCTTGGGTTTAGAGAGGACTTGTCACAGACACGAGGAGCCACATCGGAATCTATTAATGCATTACCAACTTATAAGTTTAAACTGAAGAAAAGTAGAAGTGGGGATGACAGAGAGAACAACTCCGGGGCTGGTGAAGGAGGAGGGGTTGTGGCTGCTGGAACTGAAAAGGAGCGAGTGATTTCTGGAGAAGATGCTGTAAGTACAGTACACACTGTCCTATTGAATACTAATTTTATCACTGTTTACCTTAGTATCTGTTTCTTTGGTGTAATTTGA 1164 43.04 MDVPSVELNCDSEGDSYPLLMARPEHSNSSEHIIDITGAGDSGPSGLPHGRSSNGLNSSQPEDRPSSSTRVPLSQPSTSSTGSNSRNSSFIRRGDARRRRSPLNSGLWISIELLLTMSQIIAAIIVLSLSKNEKPRAPLFAWIVGYASGCGATLPLLYWRYRHRNQASEQDSLQSSQSSSRINVPAGPFSLSVSRASEGEELQHPAPSPRGSQGSGVLSARLKVLVEYFKMGLDCFFAVWFVVGNVWIFGGHSSASEAPNLYRLCIVFLTFSCIGYAMPFILCVTICCCLPCIISILGFREDLSQTRGATSESINALPTYKFKLKKSRSGDDRENNSGAGEGGGVVAAGTEKERVISGEDAVSTVHTVLLNTNFITVYLSICFFGVI* 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20813038 20814827 - CsaV3_2G031620.1 Csa02g02343 520400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02343 387 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 364 - -
Csa02g02343 387 MobiDBLite consensus disorder prediction 1 97 - -
Csa02g02343 387 MobiDBLite consensus disorder prediction 47 90 - -
Csa02g02343 387 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 364 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02343 Csa-Chr2:20813038 Csa07g01298 Csa-Chr7:12919080 5.50E-30 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02343 - - csv:101211818 665.996