Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02363 ATGGGGGCTCCGTTCGAGGGAATTGTAAAGGATTTAAAAGGAAGGGCAGCGTGCTATAAACAGGATTGGATATGTGCACTATGTTCAGGCGTCAGGATTTTAGCTCCTACTATGTACATTTTCTTCGCCTCAGCTCTACCTGTTATTGCCTTCGGGGAGCAACTTAGTAGAGATACAGGTGGAAGATTGAGCACTGTGGAAACATTAGCCTCAACTGCGCTGTGTGGAATTATCCACTCAATCTTTGGGGGACAGCCTTTGCTGATTTTAGGTGTGGCAGAACCAACAGTTATAATGTACATTTACTTGTACAGTTTCTGCGAAGGCCGGCCAGATTTAGGAGGCAAGCTCTTTATAGCTTGGGCTGGATGGGTATGCATCTGGTCAGGAGTATTCCTGATTCTCCTTGCAATCTTTAATGCTTGCAACATCATTACCAAATTTACAAGAGTAGCGGGGGAATTATTTGGCATGCTTATTGCTGTTCTTTTCTTTCAAGAGGCAATAAGGGGACTGATCAGCGAATTCCAGATTCCCAAGTCAGAAAAGCCAGAGCTCTTGGAGTACAAATTTGAATGGTTGTATACAAATGGTTTGCTGGCAGTAATTTTTTCTGTCGGTCTACTCTTCACAGCATTGAAAAGCAGAGGTGCAAGATCATGGAAATATGGCACTGGCTGGTTCCGGAGTTTCATTGCAGATTATGGGATTCCACTTATGGTCGTGTTCTGGACCGCATTGTCATATGGAGTTCCCGGCAAAGTTCCAGATGGAGTTCCAAGGAGACTCTTTTGTCCATTACCATGGGAACCAGCCTCATTGTACCACTGGACTGTAGTGAAGGACCTGGGGAAGGTTCCAGTGACGTACATCTTTGCTGCTGCTCTGCCTGCCGTGATGATAGCAGGCCTATACTTTTTTGACCACAGTGTTGCATCACAACTGGCTCAACAGAAAGAGTTTAATCTTCAAAATCCATCTGCATATCACTATGATGTATTCTTGCTCGGGATTATGACTTTGATTTGTGGATTGCTTGGATTGCCTCCTTCTAATGGCGTCCTCCCACAGTCCCCAATGCATACCAAGAGTCTCGCAGTGCTTAAACGGCAGTTGTTTCGGAAAAAAATGGTAAAGAGGGCAAAGGAATGTATAAAACAAAAAGCGAGCAACTCTGAAATTTATGGAAAGATGCATGCCGTGTTCATTGAAATGGACGCAGCTCCTGTTCCTAAAGATCTAGAAACCTTGACAAAGGCAGTAATGAATGCCGATGAAGGTGATCAAAAGGGAAAATTCGATGCTGAGAAAAATATTGATCCTTACTTGCCTGTTCGTGTGAATGAGCAAAGAATGAGCAACTTGCTGCAGTCTTTCCTTGTTGCTGCATCAATATTCGCTATCCCTGTAATGAAAATGATACCCACATCAGTTCTTTGGGGATACTTTGCTTACATGGCCATTGATAGTCTCCCAGGAAATCAGTTCTGGGAAAGGATGTTGTTGCTCTTCATTACACCTAGTCGGCGTTTCAAAGTCTTGGAGGGGTCTCATCTATCTTTCGTTGAATCTGTGCCATTCAAGATCATTGCTTCCTTTACGCTCCTTCAGTTTGCATATTTCTTGTTGTGCTTTGGTGTAACATGGATACCTGTAGCTGGGATCATGTTCCCACTGCCATTTTTCCTCCTCATTAGCATAAGAGAGCATCTGCTTCCTAAGTTCTTCAAGCATAGCCATCTTCAAGAGTTAGATGCTTCAGAATATGAGGAGATTGAAGGTGCTGGACATCGCCCAATGAATCTCACAGCACCGGAAAAGGAGCCACCTGATACGATTGCTGAAGAGAGCAATGAAGAATACTATGATGCCGAGATATTAGATGAGATGACAACTCATAGAGGAGAATTAAAGCTTAGAACTGTAAGTTTCAAAGAAGAAAGATCGTTTCAGGTTCATCCTGAAGATTCCCTTCGAATGTGA 1983 43.42 MGAPFEGIVKDLKGRAACYKQDWICALCSGVRILAPTMYIFFASALPVIAFGEQLSRDTGGRLSTVETLASTALCGIIHSIFGGQPLLILGVAEPTVIMYIYLYSFCEGRPDLGGKLFIAWAGWVCIWSGVFLILLAIFNACNIITKFTRVAGELFGMLIAVLFFQEAIRGLISEFQIPKSEKPELLEYKFEWLYTNGLLAVIFSVGLLFTALKSRGARSWKYGTGWFRSFIADYGIPLMVVFWTALSYGVPGKVPDGVPRRLFCPLPWEPASLYHWTVVKDLGKVPVTYIFAAALPAVMIAGLYFFDHSVASQLAQQKEFNLQNPSAYHYDVFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLFRKKMVKRAKECIKQKASNSEIYGKMHAVFIEMDAAPVPKDLETLTKAVMNADEGDQKGKFDAEKNIDPYLPVRVNEQRMSNLLQSFLVAASIFAIPVMKMIPTSVLWGYFAYMAIDSLPGNQFWERMLLLFITPSRRFKVLEGSHLSFVESVPFKIIASFTLLQFAYFLLCFGVTWIPVAGIMFPLPFFLLISIREHLLPKFFKHSHLQELDASEYEEIEGAGHRPMNLTAPEKEPPDTIAEESNEEYYDAEILDEMTTHRGELKLRTVSFKEERSFQVHPEDSLRM* 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20959742 20964306 + CsaV3_2G031820.1 Csa02g02363 520420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02363 660 Pfam HCO3- transporter family 197 370 IPR011531 GO:0006820|GO:0016021
Csa02g02363 660 Pfam HCO3- transporter family 4 177 IPR011531 GO:0006820|GO:0016021
Csa02g02363 660 Pfam HCO3- transporter family 445 535 IPR011531 GO:0006820|GO:0016021
Csa02g02363 660 PANTHER ANION EXCHANGE PROTEIN 3 657 IPR003020 GO:0005452|GO:0006820|GO:0016020
Csa02g02363 660 Gene3D Helical hairpin bin 15 57 - -
Csa02g02363 660 PANTHER BORON TRANSPORTER 6-RELATED 3 657 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02363 Csa-Chr2:20959742 Csa03g02456 Csa-Chr3:22772161 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02363 K24194 - csv:101220188 1335.09