Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02432 ATGGCTAATTTTTCAATAGCTCTGTCTCTCTTCACCTTTCTCCTCCTCTTCATCAGCTTCTCAGAGGCTAGAGAGATTTTAGTCGGAGGCAAATCCAATGCCTGGAAAATCCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAACCTCTCGCTTTCGCATTGGCGACACTCTCGTGTGGGATTACGAAGATGGGAAAGATTCGGTACTGAAAGTGACGAAGGAAGATTATGAAGCCTGCAATACCGAAAACCCTGAACAGAGATTCGAAGATGGGAAGACGAAGGTGGAGCTAGAGAAGCCAGGACCATTTTATTTCATCAGTGGGGCAAAGGGTCACTGCGAGCAGGGCCAGAAGCTGATCGTTGTGGTCGTGACACCTCGCCGGAGGTTCATCGGGATCTCACCTGCGCCTTCTCCGGCGGAAAGTGAGGGTCCTGCGGTTGCTCCGTCGAGTGGAGCTGGTAATTTGAAGGTTGGGCTTTTGGCGGTGGTTGTAGGAATTTTGGGTGTTGGTGTTGGTTTGGTTTGA 537 49.72 MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTLVWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQKLIVVVVTPRRRFIGISPAPSPAESEGPAVAPSSGAGNLKVGLLAVVVGILGVGVGLV* 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21470225 21471273 + CsaV3_2G032510.1 Csa02g02432 520489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02432 178 CDD OsENODL1_like 24 126 IPR041846 -
Csa02g02432 178 Gene3D - 22 130 IPR008972 -
Csa02g02432 178 PANTHER BLUE COPPER PROTEIN 8 174 IPR039391 GO:0009055
Csa02g02432 178 SUPERFAMILY Cupredoxins 23 127 IPR008972 -
Csa02g02432 178 Pfam Plastocyanin-like domain 35 120 IPR003245 GO:0009055
Csa02g02432 178 PANTHER EARLY NODULIN-LIKE PROTEIN 3 8 174 - -
Csa02g02432 178 ProSiteProfiles Phytocyanin domain profile. 24 128 IPR003245 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02432 Csa-Chr2:21470225 Csa03g00531 Csa-Chr3:4428339 1.62E-38 dispersed
Csa02g02432 Csa-Chr2:21470225 Csa07g02147 Csa-Chr7:20473111 5.16E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02432 - - csv:101210664 280.026