Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02472 ATGGCAGCGCCGAAGCCTCGCACCACTCGGTCCAGGTCTCACAGGGACGTTCCTGATTTGGAGAAGATGGACGCTGCTTACAGTTGGGACGCCCTTGAATGGACCAAAATTGAGCCTGTTACGCGGTCGGTTTCGCGTGTCAACTTGGATTGCTTACTTGAGGCTGAACAAGTGATTGCTGAGGGCTATGGTGTTGTTCTTGTGAATACTGATGAGGCTGGTACCTTGTTTGTAACCAATTTTCGTCTTCTATTTCTAAGTGAAGGAACCATGGACGTTATTTCCCTTGGCACTATACCACTGGCGACAATTGATAAATTCAACAAAATTGTTGTGAAGTCAAATGCTGTCTCTCGCCAATCTGAAAAGTCTTCACCATCTAGGCGACTTCTTCAGGTCATTGGAAAAGACATGAGAATTATTGTCTTTGGTTTCCGTCCAAGAACAAAACAGAGGCGTAAAGTATATGATGCATTATTGAGGTGTATGAAACCGGCAAGAATATGGGATCTATATGCATTTCAGTGTGGGCCATCCAAGTACAGTAATACAGACCCAAAAGTTCGTTTGCTAAATGAGTATTTTCGGCTTCTTGGAAAGGGTTCCCTACATGCATCAATGAGCATGATTGAAGATGGATCATTTACATTGTCCAATGAATTGTGGAGAATAACTAAAATCAATTCCAGTTATACTCTGTGTCAGAGTTATCCATTTGCATTGGTTGTTCCTAAACACTTTAGTGATGAAGAGATGTTGCAGGCTTCTACCTTTCGTGCTAGATGTCGTTTGCCTGTTGTTTCGTGGTGCAATCCTGGGACTGGAGCTGTTCTTGCACGTTCATCTCAACCTTTAGTTGGTCTTATGATGAATATGAGAAGTAATACCGATGAAAAGCTTGTTGCTGCACTTTGCTCGAATCTTGCTGGTGTTCGAGGGTCACAGCGTAGGAAGCTTTATATAGCGGATGCAAGGCCTAGAAAAAATGCTTTAGCAAATGGAGCCATGGGAGGTGGCTCGGAGTCTTCATCAAATTATTTTCAATCTGAGATAGTCTTTTTTGGGATTGACAACATACATGCAATGAGGGAAAGTCTTACTCGGCTAAGAGAGTACTTGGATACACATGGTGAAAAATCATCTGATGGAATGTCATCATTCTTGAGACATGGTGGATGGACTTGGGGTGGAGGTAATCTTAGTAGCATGTCTGCATCTGTATCAACCCTGGGAGATAGTGGTTGGTTAATCCATGTTCAAAGCGTCTTGGCTGGTTCAGCATGGATTGCTGCACGTGTTGCTTTGGAAAAAGCAACGGTGCTAGTTCATTGCAGTGATGGCTGGGACAGAACAACACAACTAGTTTCACTTGCTAGCTTACTGCTTGATCCATATTATCGGACGTTTGCTGGATTTCAGGCGCTGGTTGAAAAGGATTGGCTAGCATTTGGTCATCCTTTCTCAGATCGGTCTGGCATGCCGACTGTATCGGGAAGTGGTAACATGCCATATGAACTATCTAGGCAATCTTCAACTGGAAGTTTTTCTTCTTCACCCATGCGTCAGTCATCTGGAGCATTCATATCTCAAGCTTCCAGTTCTCCTCATGCACAAACATCCAACAACTGTTCTCCCATATTCTTACAGTGGGTTGATTGTGTTTCACAACTTCTGCGCATGTATCCCTTTGCTTTTGAGTTCTCTTCAGCATTTCTTGTGGATCTGTTGGATTGTATGCTTTCTTGTCGCTTTGGGAACTTCTTATGCAATTGTGAGAAGGAGCGTCAGCAATGTGCAGTTTCTGAAGTTTGTGGCTGTCTATGGGCATATTTAGCCGATTTACGAGCCTCGGAAGGAGGTTCACATGTGCATTATAACCTTTTCTATGATCCAACGATTCCTACCAAACATGAAGGTGCTCTCTTACCTCCTGCAGCAGCTCTAGCTCCAACTCTCTGGCCACAATTTCATCTTCGTTGGGCTTGCCCAAAAGAATCTCAAGCTGGGGAACTTGAAGTCAGATGCAGGAAAATGGCTATACAATTATCTGAAATGCAGAAGGACAAAGAAATAGCCGAGAGAAAAGCCCAGGAGATGACGGCTGCCATGGAATCATTAAAATCAGAGTTGCAAAACGAGAAACAGTTAAGTACATCAGCTAGGAACGTTGCAAAAAATGCAAGCAAAGAATGTGAAGCCATAAAGAGAGCAATTCAGTCTCTAGGTTGCAAGGTTCAAGTCTCTAGTAATGGCTATTGTACTGTTGACATTGATGGCGACCTGATGAAAAAATCCAACCAGAAAAGTCATCCTGCTTCAAGAAGGACTTCACATCGTTCACTGCCATCCCCTAGTGAAGAGAATGATCTCTCCCTTTCTATAACAGTTACAGCAGATGATGTGCCAAGTAACCCCCTCAGTCACATCTGTGAAGCTCTTTGCCCATTACGCACTCGGGATGGAGGATGCCAGTGGCCTGATGCTGGTTGTGCTCACATGGGTAGCCAATTTATTGGAATGAAGGCAAATTTCGAAGCATTCGATCAACTATCCATATATGATGGTTATTTCAAGCCAGAGTGA 2583 43.59 MAAPKPRTTRSRSHRDVPDLEKMDAAYSWDALEWTKIEPVTRSVSRVNLDCLLEAEQVIAEGYGVVLVNTDEAGTLFVTNFRLLFLSEGTMDVISLGTIPLATIDKFNKIVVKSNAVSRQSEKSSPSRRLLQVIGKDMRIIVFGFRPRTKQRRKVYDALLRCMKPARIWDLYAFQCGPSKYSNTDPKVRLLNEYFRLLGKGSLHASMSMIEDGSFTLSNELWRITKINSSYTLCQSYPFALVVPKHFSDEEMLQASTFRARCRLPVVSWCNPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCSNLAGVRGSQRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESLTRLREYLDTHGEKSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQSVLAGSAWIAARVALEKATVLVHCSDGWDRTTQLVSLASLLLDPYYRTFAGFQALVEKDWLAFGHPFSDRSGMPTVSGSGNMPYELSRQSSTGSFSSSPMRQSSGAFISQASSSPHAQTSNNCSPIFLQWVDCVSQLLRMYPFAFEFSSAFLVDLLDCMLSCRFGNFLCNCEKERQQCAVSEVCGCLWAYLADLRASEGGSHVHYNLFYDPTIPTKHEGALLPPAAALAPTLWPQFHLRWACPKESQAGELEVRCRKMAIQLSEMQKDKEIAERKAQEMTAAMESLKSELQNEKQLSTSARNVAKNASKECEAIKRAIQSLGCKVQVSSNGYCTVDIDGDLMKKSNQKSHPASRRTSHRSLPSPSEENDLSLSITVTADDVPSNPLSHICEALCPLRTRDGGCQWPDAGCAHMGSQFIGMKANFEAFDQLSIYDGYFKPE* 861
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21736837 21759928 - CsaV3_2G032910.1 Csa02g02472 520529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02472 860 MobiDBLite consensus disorder prediction 764 790 - -
Csa02g02472 860 ProSitePatterns Tyrosine specific protein phosphatases active site. 442 452 IPR016130 GO:0016311|GO:0016791
Csa02g02472 860 Coils Coil 675 716 - -
Csa02g02472 860 ProSiteProfiles Myotubularin phosphatase domain. 199 657 IPR010569 -
Csa02g02472 860 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 216 661 IPR029021 -
Csa02g02472 860 Gene3D - 63 163 IPR011993 -
Csa02g02472 860 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 19 859 - -
Csa02g02472 860 MobiDBLite consensus disorder prediction 776 790 - -
Csa02g02472 860 PANTHER MYOTUBULARIN-RELATED 19 859 IPR030564 -
Csa02g02472 860 Pfam Myotubularin-like phosphatase domain 172 596 IPR010569 -
Csa02g02472 860 CDD PTP-MTM-like 262 556 - -
Csa02g02472 860 SUPERFAMILY PH domain-like 51 176 - -
Csa02g02472 860 SMART gram2001c 43 111 IPR004182 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02472 K18081 - csv:101204839 1716.05