Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02590 ATGGGATTGAGGTTTCTTTGGAAAGGTTTGGTTTTAGCAGTGGTTGTTGCGTGGGCGGCGACGGGGACGGTGAAGAGAGGGGAGGCGCAATTAGTTGAAAATTTCTATGGCTCAAATTGCCCAAACTTAGAGCAAATCGTTACGCAATCTGTTCAAACCAAATTTGCTCAAACTTTTGTTACAATTCCCGCAACTTTGAGACTCTTCTTCCATGATTGCTTTGTCGAGGGATGCGATGCTTCAGTGTTGATAGCTTCTCTAAATGGAGATGCAGAGAAAGATGCAAAAGACAATCTTTCATTAGCGGGAGATGGATTTGACACCGTTGTTAAAGCAAAGCAAGCTGTTGAAAATGTTTGTCCTGGTCTCGTTTCTTGTGCTGACATCTTGGCTCTTGCAACTAGAGATGTTGTTAACTTGGCAGGAGGTCCACAATATAGTGTGGAACTTGGACGTAGAGATGGGCTTATTTCTCAAGCATCTCGAGTGGCAGGAAACCTACCAGAACCATTCTTCGATCTGAACCAACTAACAAACATGTTTGCCGCCCACAACCTAACCCTAATCGATATGATCGCCCTTTCTGGAGCCCACACCCAGGGATTCTCCCACTGTGACCGTTTCGCAAATCGCCTTTACTCATTTTCACCTTCTTCTCCAACGGACCCATCGTTGGACCCCGAGTACGCACGGCAGCTAATGGATGCTTGTCCGCAGAATGTGGATCCCAGTGTGGCCATCAACATGGACCCTATAACTCCTCAGACCTTTGACAACGTTTATTATCAAAACCTCATCTCTGGCAAAGGCTTATTCACTTCCGATCAGATTCTGTTTACCGAGTCTGAATCACAACCAACAGTTAGTAGTTTTGCCACCAATGGAGCAGAGTTTAATGCAGCGTTTATCACAGCCATGACCAAGTTAGGTCGAGTTGGGGTTAAGACCGGTAATGATGGTGAAATTCGAAGGGATTGCACTGCCTTTAATTCCTAA 996 45.48 MGLRFLWKGLVLAVVVAWAATGTVKRGEAQLVENFYGSNCPNLEQIVTQSVQTKFAQTFVTIPATLRLFFHDCFVEGCDASVLIASLNGDAEKDAKDNLSLAGDGFDTVVKAKQAVENVCPGLVSCADILALATRDVVNLAGGPQYSVELGRRDGLISQASRVAGNLPEPFFDLNQLTNMFAAHNLTLIDMIALSGAHTQGFSHCDRFANRLYSFSPSSPTDPSLDPEYARQLMDACPQNVDPSVAINMDPITPQTFDNVYYQNLISGKGLFTSDQILFTESESQPTVSSFATNGAEFNAAFITAMTKLGRVGVKTGNDGEIRRDCTAFNS* 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22572639 22574651 - CsaV3_2G034090.1 Csa02g02590 520647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02590 331 PANTHER PEROXIDASE 23 331 - -
Csa02g02590 331 Pfam Peroxidase 49 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 Gene3D - 34 330 - -
Csa02g02590 331 SUPERFAMILY Heme-dependent peroxidases 30 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 CDD secretory_peroxidase 30 329 IPR033905 GO:0004601|GO:0042744
Csa02g02590 331 Gene3D Peroxidase, domain 2 168 309 - -
Csa02g02590 331 ProSiteProfiles Plant heme peroxidase family profile. 30 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PANTHER - 23 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02590 331 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02590 Csa-Chr2:22572639 Csa02g02592 Csa-Chr2:22580320 1.66E-164 dispersed
Csa02g02590 Csa-Chr2:22572639 Csa02g02591 Csa-Chr2:22576715 6.70E-162 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02590 K00430 - csv:101213580 649.047