Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02592 ATGGCAGGCATGGCAATGCGAGTGGCGGTGTTGTCTTTGGCTCTGCTTTGCATGCTCATTGGCGTTGTCCATGCGCAGCTCTCCTTCAACTTCTACAATTCCTCCTGCCCAAATGTCGAACAAATCGTTCGCCAAGCCGTAAGCTTAAAGATTAACCAAACATTCGTTACCATTCCAGCAACTCTTAGGCTTTTCTTCCATGACTGCTTTGTTCAGGGATGTGATGCTTCGGTTATGATAGCGTCCGCAAGTGGTGATGCTGAAAAAGACTCAGAGGACAACTTGTCGTTGGCAGGAGATGGGTTTGATACTGTGATTAAGGCGAAGCAGGCTGTGGAAGCTCAATGTCCTGGAAAAGTATCGTGTGCAGATATTTTGGCCATTGCTGCAAGGGATGTCGTGGTTTTGGCGGGAGGACAAAATTTTGCTGTGGAATTAGGACGACGAGATGGGCTAATCTCAAAAGCCTCATTGGTAGCTGGAAACTTACCGGGACCAAACTTCAACCTAAGCCAACTAAACACAATGTTTGCCAAAAATAACCTAACCCAAACCAACATGATCGCATTATCAGGAGCCCACACGGTTGGGTTCTCACACTGCAGCCGTTTCGCGAACCGTCTCTACAACTTCTCAGCCACTTCCAAAGTAGACCCTTCTCTGGATCCGAAGTACGCCAAGCAGCTCATGGGCGCATGCCCACAAGACGTGGACCCTAGAATCGCTGTGAACATGGACCCAGTAACCCCAAGGAAAATGGACAACGTGTATTACCAAAATCTTGTGAACCATAAGGGGCTTTTCACGTCGGACCAAGTGCTGTATACGGATCCATTGTCGCAAGCCACCGTGAGTGGGTTTGCGAATGATCGCAGTGGGTTCAATAATGCGTTTGGAGAGGCTATGGTTCAGCTTGGGAGAGTGGGGGTTAAGACGGGGGCTGCGGGTGAGATTAGAAAAGATTGTACTGCCTTTAATTAA 981 48.52 MAGMAMRVAVLSLALLCMLIGVVHAQLSFNFYNSSCPNVEQIVRQAVSLKINQTFVTIPATLRLFFHDCFVQGCDASVMIASASGDAEKDSEDNLSLAGDGFDTVIKAKQAVEAQCPGKVSCADILAIAARDVVVLAGGQNFAVELGRRDGLISKASLVAGNLPGPNFNLSQLNTMFAKNNLTQTNMIALSGAHTVGFSHCSRFANRLYNFSATSKVDPSLDPKYAKQLMGACPQDVDPRIAVNMDPVTPRKMDNVYYQNLVNHKGLFTSDQVLYTDPLSQATVSGFANDRSGFNNAFGEAMVQLGRVGVKTGAAGEIRKDCTAFN* 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22580320 22582841 - CsaV3_2G034110.1 Csa02g02592 520649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02592 326 Pfam Peroxidase 47 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 Gene3D - 30 326 - -
Csa02g02592 326 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 Gene3D Peroxidase, domain 2 164 305 - -
Csa02g02592 326 PANTHER PEROXIDASE 6 326 - -
Csa02g02592 326 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601|GO:0042744
Csa02g02592 326 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02592 326 PANTHER - 6 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00826 Csa-Chr1:5207608 Csa02g02592 Csa-Chr2:22580320 2.98E-96 dispersed
Csa01g01265 Csa-Chr1:7902328 Csa02g02592 Csa-Chr2:22580320 1.72E-89 dispersed
Csa02g01414 Csa-Chr2:13518309 Csa02g02592 Csa-Chr2:22580320 3.42E-148 dispersed
Csa02g02590 Csa-Chr2:22572639 Csa02g02592 Csa-Chr2:22580320 1.66E-164 dispersed
Csa02g02592 Csa-Chr2:22580320 Csa06g03007 Csa-Chr6:25927418 3.17E-146 dispersed
Csa02g02591 Csa-Chr2:22576715 Csa02g02592 Csa-Chr2:22580320 1.09E-158 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02592 K00430 - csv:101213098 647.506