Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g02593 | ATGGAAGTTGAATCACAATCAGAGTTCCCGTGCTGGAAGCCTCTCCAACGGAGGTTCGATCCTGATTCTCCCTTTTTTGCCTCTGGAAATGTCGAGCGCGAAATCTTAGCCAAACAGGTTGCCTTGGATTTAACCGAAGATGAAAAGCTACAGCTGCATAATATGGCAGTTGATGCTCGCAGTGAAATCTTTTGCCCAATTGTTGGTTGCGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATTCAAGGCATACTGCCTCTTGTTCAGTTTGCCCTAGAGTTTACCCGACATCACGCCTACTTAGTTTACATGTCTCTGAGGCGCATGACTCGTTCTTTCAAGCAAAAGTCGCGCGTGGCTATGACATGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAAAGCTATAAAAGCAGACACCAGCATCTAGTGGACAAGCATAAATTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCATCCATCTAAAAAACAAAGACAGAAAACGTATCGTAAACAAGCCAGTCAAGGAAGGGAAGAAACCTCCAAAATGGAAGTCGAGAATGAAATTATGGATGGCCTCATTTCAGGAGTATCTAAACTAAGTACTTCGGACTCAACTCCTTCGTCAATCAGCTTTGGCCGGAGGCACACTCGAGGGTTAACATTTGTTCCTCGAGCAGTTCAGCGAGAAAAAGTGTCAGACTCATCAACAGCTGGAACAAAGAGATGA | 750 | 43.6 | MEVESQSEFPCWKPLQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDARSEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRHQHLVDKHKFSASFEFFKKAHPSKKQRQKTYRKQASQGREETSKMEVENEIMDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRAVQREKVSDSSTAGTKR* | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 22584960 | 22587404 | + | CsaV3_2G034120.1 | Csa02g02593 | 520650 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g02593 | 249 | MobiDBLite | consensus disorder prediction | 207 | 249 | - | - | |
Csa02g02593 | 249 | MobiDBLite | consensus disorder prediction | 207 | 222 | - | - | |
Csa02g02593 | 249 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 130 | 153 | IPR013087 | - | |
Csa02g02593 | 249 | PANTHER | UNCHARACTERIZED | 4 | 238 | IPR039258 | - | |
Csa02g02593 | 249 | MobiDBLite | consensus disorder prediction | 166 | 192 | - | - | |
Csa02g02593 | 249 | SMART | c2h2final6 | 128 | 153 | IPR013087 | - | |
Csa02g02593 | 249 | SMART | c2h2final6 | 90 | 113 | IPR013087 | - | |
Csa02g02593 | 249 | SMART | c2h2final6 | 63 | 88 | IPR013087 | - | |
Csa02g02593 | 249 | MobiDBLite | consensus disorder prediction | 178 | 192 | - | - | |
Csa02g02593 | 249 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 92 | 113 | IPR013087 | - | |
Csa02g02593 | 249 | PANTHER | ZINC FINGER PROTEIN 511 | 4 | 238 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
31044 | None | None | None | None | Csa | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g02593 | - | - | csv:101212859 | 491.5 |