Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02593 ATGGAAGTTGAATCACAATCAGAGTTCCCGTGCTGGAAGCCTCTCCAACGGAGGTTCGATCCTGATTCTCCCTTTTTTGCCTCTGGAAATGTCGAGCGCGAAATCTTAGCCAAACAGGTTGCCTTGGATTTAACCGAAGATGAAAAGCTACAGCTGCATAATATGGCAGTTGATGCTCGCAGTGAAATCTTTTGCCCAATTGTTGGTTGCGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATTCAAGGCATACTGCCTCTTGTTCAGTTTGCCCTAGAGTTTACCCGACATCACGCCTACTTAGTTTACATGTCTCTGAGGCGCATGACTCGTTCTTTCAAGCAAAAGTCGCGCGTGGCTATGACATGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAAAGCTATAAAAGCAGACACCAGCATCTAGTGGACAAGCATAAATTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCATCCATCTAAAAAACAAAGACAGAAAACGTATCGTAAACAAGCCAGTCAAGGAAGGGAAGAAACCTCCAAAATGGAAGTCGAGAATGAAATTATGGATGGCCTCATTTCAGGAGTATCTAAACTAAGTACTTCGGACTCAACTCCTTCGTCAATCAGCTTTGGCCGGAGGCACACTCGAGGGTTAACATTTGTTCCTCGAGCAGTTCAGCGAGAAAAAGTGTCAGACTCATCAACAGCTGGAACAAAGAGATGA 750 43.6 MEVESQSEFPCWKPLQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDARSEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRHQHLVDKHKFSASFEFFKKAHPSKKQRQKTYRKQASQGREETSKMEVENEIMDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRAVQREKVSDSSTAGTKR* 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22584960 22587404 + CsaV3_2G034120.1 Csa02g02593 520650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02593 249 MobiDBLite consensus disorder prediction 207 249 - -
Csa02g02593 249 MobiDBLite consensus disorder prediction 207 222 - -
Csa02g02593 249 ProSitePatterns Zinc finger C2H2 type domain signature. 130 153 IPR013087 -
Csa02g02593 249 PANTHER UNCHARACTERIZED 4 238 IPR039258 -
Csa02g02593 249 MobiDBLite consensus disorder prediction 166 192 - -
Csa02g02593 249 SMART c2h2final6 128 153 IPR013087 -
Csa02g02593 249 SMART c2h2final6 90 113 IPR013087 -
Csa02g02593 249 SMART c2h2final6 63 88 IPR013087 -
Csa02g02593 249 MobiDBLite consensus disorder prediction 178 192 - -
Csa02g02593 249 ProSitePatterns Zinc finger C2H2 type domain signature. 92 113 IPR013087 -
Csa02g02593 249 PANTHER ZINC FINGER PROTEIN 511 4 238 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
31044 None None None None Csa TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02593 - - csv:101212859 491.5