Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02696 ATGAGAATGCAGAGGCTTACTTTTTTGGTGTTGGCCACTATAGTTGGTCTTCTAAGCCTGATAGGCTCCACTCAAGCTCAGTTAAAGCTTGGTTTCTATGCCAAAAGCTGCCCACACGCTGAGAAGATTGTGCTAGATTTCGTTCACCAGCATATCCACAATGCCCCTTCATTGGCAGCAACTTTCATTAGAATGCACTTCCACGATTGCTTTGTCAGGGGTTGTGATGCATCTGTGCTTATAAACTCCACCTCAAACAACCAAGCTGAGAGGGATTCTGCACCAAATCAAACACTCAGAGGCTTTGACTTCATTGATAGAGTCAAAAGCTTACTTGAAGATGAATGCCCTGGAGTGGTCTCTTGCGCAGATGTTCTTTCCTTGATTGCAAGAGATACCATTGTAGCCACAGGAGGTCCTTACTGGGAAGTTCCAACTGGCCGAAGAGATGGAGTGATCTCAAGATCAAGAGAAGCTTTAAATAACATTCCTCCTCCATTTGGAAACTTGTCCACGCTCCAAAGACTTTTCTCAAACCAAGGCCTTGATCTAAAAGACTTGGTGTTACTATCTGGCGCTCACACAATCGGCATAGCACACTGCCAATCATTCAGCAATCGACTCTACAATTTCACCGGGGTAGGAGACCAAGATCCCTCTCTAGACCCAAGATACGCTGCTAATCTGAAGGCTAACAAATGCCGAACTCCCACCGCCAACAACAAAGTGGAAATGGACCCAGGAAGTCGTAACACTTTTGACCTTAGCTACTATTCTCTTCTACTAAAAAGGAGGGGCCTCTTCGAATCCGATGCTGCTCTTACAACAGACGCAACTACATTGGGTTTAGTTCAGAAACTGGTAGAAGGACCCATTGAAGAATTCTTCGCTGAATTTGCAGCATCCATGGAGAAAATGGGTCGGATTAAAGTGAAAACTGGAACTGAAGGTGAAATCAGAAGGAGATGCGGTGTGGTGAATAGTTGA 987 44.98 MRMQRLTFLVLATIVGLLSLIGSTQAQLKLGFYAKSCPHAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINSTSNNQAERDSAPNQTLRGFDFIDRVKSLLEDECPGVVSCADVLSLIARDTIVATGGPYWEVPTGRRDGVISRSREALNNIPPPFGNLSTLQRLFSNQGLDLKDLVLLSGAHTIGIAHCQSFSNRLYNFTGVGDQDPSLDPRYAANLKANKCRTPTANNKVEMDPGSRNTFDLSYYSLLLKRRGLFESDAALTTDATTLGLVQKLVEGPIEEFFAEFAASMEKMGRIKVKTGTEGEIRRRCGVVNS* 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23513034 23516310 + CsaV3_2G035150.1 Csa02g02696 520753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02696 328 PANTHER PEROXIDASE 14 327 - -
Csa02g02696 328 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Csa02g02696 328 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601|GO:0042744
Csa02g02696 328 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PANTHER PEROXIDASE 25-RELATED 14 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Csa02g02696 328 Gene3D Peroxidase, domain 2 164 306 - -
Csa02g02696 328 Pfam Peroxidase 46 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa02g02696 328 Gene3D - 31 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02696 Csa-Chr2:23513034 Csa06g00563 Csa-Chr6:4818821 2.67E-102 dispersed
Csa03g01667 Csa-Chr3:12492194 Csa02g02696 Csa-Chr2:23513034 1.16E-90 transposed
Csa07g00521 Csa-Chr7:3786980 Csa02g02696 Csa-Chr2:23513034 1.01E-80 transposed
Csa02g02696 Csa-Chr2:23513034 Csa07g00375 Csa-Chr7:2787973 6.34E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02696 K00430 - csv:101213629 639.032