Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02712 ATGGATTTTGATCACTTGCTTTACGCTTTGCTCTCTCTCATTTCTCTTCTACTTGGCTACTCCTTTTTATTTAAACCTCATCGCTTAAACCTCCCACCAACTCCACTTTTTGGTCTTCCATTCATAGGTCATCTTCATCTTCTCAAACATCCTGTCCACAAAACATTACAAACCCTCTCCCAAAAGTATGGCCATGTCTTCTCTCTCAAATTCGGTTCTCGTCTCGTCCTACTTGTATCTTCTCCTTCAGCCGTCCAAGAATGTTTCACAAAGAACGATATCATTCTTGCAAACCGACCTTCTTTAAACTCCGGAAAGTACTTATCATACAACAATACCACCATGGCGGTGTCCCCTTATGGTGAACATTGGCGAAACCTCCGCCGAATTTGTACTCTCGAGATTTTCTCGACAACTCGTCTTAATTCGTTCTCGAGAATTCGAGAAGAGGAAGTCAAACGTTTACTATGTAAATTATGTGGTAATTATAAGTTTGAAGATGAGTTTAGGGTTGTGGAATTGGAGTCAATGTTGTTGGATCTTACATCCAATATTGTCATGAGAATGGTGGGTGGAAAGAAGTTTTGCAAAGAGAATAATAAAAATATTAATGTGTTGGAAGATGAGGGATATTGCAAAAGATTAAAAGAGTTGGTGACACAAATAATGGCACATGCTGGATCAACAAATCCAGGGGATTTCATACCTTTATGGAATTGGATTGATCCAAGTGGTTATAATAAAAGGATAATGAAGATTGGAAGAAGAATGGATGAAGTTCTTCAAAGATTAGTTGATGAGATTAGGAATGAAGAAGATGAAGGAAACACTATGATTCAACATTTACTTCGTTTGCAGAAAACCGATCCGAAATATTACAGTGACCTAATTATCAAAGGTCTCATACAAGATATATTAATAGCAGGGATTGACACAAGCGCTGTGACATTACAATGGGCACTGTCTCATTTACTTAACAATCCAATCGTCTTAGATAAGGCCAAAGCCGAAATAGATTCCTATATAGGACAAGAACGTATGGTGAATGAAGTCGATTTATCGAGTTTAAGTTACCTACAAGGAATAATCTCCGAGACTCTTCGGCTAAGTCCACCTGGTCCTTTACTCGTACCACATTGTGCATCTGAAGACTGCAAAATAGGAGGTTATGACGTTCCACGTAATACAATTGTATTGATTAATGCTTGGGCTATACATCGAGATCCAAATGTATGGGAAGATGCTGGTAGTTTTAAGCCAGAAAGACATGTAAATGCGGTTGGATTTGAGAACTCTTACAAATTGTTGCCATTTGGTTTGGGGAGGAGGGCATGCCCCGGTATGGCTATGGCCCAACGCGTGGTTGGCTTGACATTGGCATCGTTGATTCAATGTTTTGAGTGGAAAAAAATGAGTAATTTGTTAGTTGATATGAGGGAAGGTGAAGGGCTCACAATGCCTAAAGTTGAGTCATTAGTGGCCAAGTGTAGGCCGCGTTTCATTATGAAAGTGGTACTTGGTGAAAAAAATGGTCATAATTAA 1542 39.11 MDFDHLLYALLSLISLLLGYSFLFKPHRLNLPPTPLFGLPFIGHLHLLKHPVHKTLQTLSQKYGHVFSLKFGSRLVLLVSSPSAVQECFTKNDIILANRPSLNSGKYLSYNNTTMAVSPYGEHWRNLRRICTLEIFSTTRLNSFSRIREEEVKRLLCKLCGNYKFEDEFRVVELESMLLDLTSNIVMRMVGGKKFCKENNKNINVLEDEGYCKRLKELVTQIMAHAGSTNPGDFIPLWNWIDPSGYNKRIMKIGRRMDEVLQRLVDEIRNEEDEGNTMIQHLLRLQKTDPKYYSDLIIKGLIQDILIAGIDTSAVTLQWALSHLLNNPIVLDKAKAEIDSYIGQERMVNEVDLSSLSYLQGIISETLRLSPPGPLLVPHCASEDCKIGGYDVPRNTIVLINAWAIHRDPNVWEDAGSFKPERHVNAVGFENSYKLLPFGLGRRACPGMAMAQRVVGLTLASLIQCFEWKKMSNLLVDMREGEGLTMPKVESLVAKCRPRFIMKVVLGEKNGHN* 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23623778 23626280 - CsaV3_2G035310.1 Csa02g02712 520769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02712 513 Coils Coil 254 274 - -
Csa02g02712 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Csa02g02712 513 Gene3D Cytochrome P450 24 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 7 505 - -
Csa02g02712 513 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 505 - -
Csa02g02712 513 Pfam Cytochrome P450 32 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02712 513 SUPERFAMILY Cytochrome P450 32 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02712 Csa-Chr2:23623778 Csa02g02726 Csa-Chr2:23716685 0 dispersed
Csa02g02712 Csa-Chr2:23623778 Csa02g02713 Csa-Chr2:23633121 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02712 K13260 - csv:101205626 1024.62