Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g02713 | ATGGATCTTCTTTTGCTCTCTATTTCTCTAATTTCTCTATTCTCTCTTCTCCTTGCCTTTAACTTCCTCCATCAACCTCGTCACAAAAACCTCCCACCATCTCCATCTTTTTCTCTTCCACTAATAGGACATCTTCATCTCCTCAGACATCCTGTCCATCGAACCCTTCACAACCTCTCTGAAAAGCTTGGCCCCGTCCTCTCTCTCCGATTCGGCTCATGTCTTGCGGTAGTTGTATCCTCTTCTTCTCTTGTCCAAGAATGCTTTACAAAGAATGATATAATTCTTGCCAATCGCCCTTTGGTAAAGAGTGGAAAGTACTTATCATACAACTATACCAACTTAGTCATCTCGCCTTATGGCGAACATTGGCGAAACCTCCGTCGAATTAGTACCCTCGAGATTTTCTCCATAAGTCGCCTTAACCTTTTTGTGGGAGGTAGAGAAGATGAAGTCAAACGTTTGTTGTGTAAATTGTGGGATGGATATTCGTTTGAAGAGTTTAAGGTAGTGGAGATGTTCCCTATGTTTATGGATCTTATGTTCAATATTCTTATGAGAATGATGAGTGGAAAGAAGAATTGTGGTGACGATTTGAAAGATGAGGAAAGATCCAAGAAATTTAAAGAGATGGTGAAACAAGTTTTGGCAATTGCTGGAGCAGGAAATCCAGGAGATTTTATACCCTTATGGAATTGGATTGATCCAACTTGTTATAATAAGAGGGTAAAGAAGCTTTCAAAGACATCAGATGAACTTATTCAGCAATTAATTGACGAGATCAGGAATCAGAATGATGGAGAAAATACAATGATTCAACATTTACTTGGCCTGCAGAATACTCAACCTGAAAATTATAGTGATCAAATTATCAAAGGTCTTATACAAGTAATACTATTAGCAGGAATTGATACAGCAGCTGTGACCTTAGAATGGGCTTTATGTCATCTGCTCAATAATCCAGAAGTATTGAAGAAAGCTACAGATGAGATAGATAGCTCCATTGGTCAAGAGTGTTTAGTTAAGGAAGTTGATTTGTTGAGATTGAGTTATTTACAAGGAATAATCTTTGAGACCCTACGATTGAATCCAGCAACTCCCTTGCTTGTGCCACATTGTGCATCTGAAGACTGCAAAATAGGAGGCTATGATGTACCACGTGACACAACCGTGTTGATTAATGCTTGGGCAATACATAGAGACCCAAGCCTATGGGAAGATGCCACAAGTTTCAAGCCTGAAAGGCATGAAAATGCAAATGGAGTTGATGCATACAAACTATTGCCATTTGGGTTGGGAAGGAGAGCTTGCCCTGGAGTGGGAATGGCACAACGTGTGGTTGCCTTGACTTTGGCATCATTGCTTCAATGCTTTGAGTGGCAAAGACTCGGCAACTCATTGGTGGATATGACAGAAGGTGAAGGACTCACTATGCCTAAAGCTCAACCATTGACAGCCAAGTGTAGACCACGTCCAATTATGATGAAAATTTTATCAATGAAACAATAA | 1509 | 40.03 | MDLLLLSISLISLFSLLLAFNFLHQPRHKNLPPSPSFSLPLIGHLHLLRHPVHRTLHNLSEKLGPVLSLRFGSCLAVVVSSSSLVQECFTKNDIILANRPLVKSGKYLSYNYTNLVISPYGEHWRNLRRISTLEIFSISRLNLFVGGREDEVKRLLCKLWDGYSFEEFKVVEMFPMFMDLMFNILMRMMSGKKNCGDDLKDEERSKKFKEMVKQVLAIAGAGNPGDFIPLWNWIDPTCYNKRVKKLSKTSDELIQQLIDEIRNQNDGENTMIQHLLGLQNTQPENYSDQIIKGLIQVILLAGIDTAAVTLEWALCHLLNNPEVLKKATDEIDSSIGQECLVKEVDLLRLSYLQGIIFETLRLNPATPLLVPHCASEDCKIGGYDVPRDTTVLINAWAIHRDPSLWEDATSFKPERHENANGVDAYKLLPFGLGRRACPGVGMAQRVVALTLASLLQCFEWQRLGNSLVDMTEGEGLTMPKAQPLTAKCRPRPIMMKILSMKQ* | 503 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 23633121 | 23635973 | + | CsaV3_2G035320.1 | Csa02g02713 | 520770 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g02713 | 502 | Pfam | Cytochrome P450 | 32 | 480 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 8 | 495 | - | - | |
Csa02g02713 | 502 | Gene3D | Cytochrome P450 | 21 | 493 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PRINTS | P450 superfamily signature | 428 | 437 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PRINTS | P450 superfamily signature | 437 | 448 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | SUPERFAMILY | Cytochrome P450 | 32 | 491 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 430 | 439 | IPR017972 | GO:0005506|GO:0016705 | |
Csa02g02713 | 502 | PANTHER | CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED | 8 | 495 | - | - | |
Csa02g02713 | 502 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PRINTS | E-class P450 group I signature | 353 | 371 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PRINTS | E-class P450 group I signature | 427 | 437 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02713 | 502 | PRINTS | E-class P450 group I signature | 437 | 460 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g02713 | Csa-Chr2:23633121 | Csa02g02726 | Csa-Chr2:23716685 | 0 | dispersed | |
Csa02g02713 | Csa-Chr2:23633121 | Csa02g02715 | Csa-Chr2:23655113 | 6.87E-141 | proximal | |
Csa02g02712 | Csa-Chr2:23623778 | Csa02g02713 | Csa-Chr2:23633121 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g02713 | K13260 | - | csv:101205391 | 971.074 |