Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02725 ATGGATAATAACATTTTGGTCTACATTTTCTTCTTTCTGATCTCTCTCCTTTTGGGCCTCAAACTTTTGCTACACCATGGCAAAAACCTTCCACCAACCCCACTCTTTTCCCTTCCATTAATAGGCCATCTCCATCTCCTCAAACACCCTATCCACCAAACCCTTCACAGCCTCTCAAAAAAGTATGGCCATGTCTTTTCTCTCCGATTCGGCTCCCATCTCGTTGTAGTTATATCATCTCCTTCCGCTGTTCGTGAATGCTTCACAAAAAACGACATCATTCTCGCAAATCGACCATTCTTAAACACCGGAAAGCACCTATCATACAACTTCACGGTACTTGCCGTCGCCCCATATGGAGAGCTTTGGCGTCGCCTTCGCCGCATTAGTACTTGTGAGATTTTCTCCACAAGTAAACTCAATTCATTCTCATGTATAAGACAAGATGAAGTGAAGCGATTGTTGCATAAATTGTGTAATCGCAATTCGGTCGAAGAATTACTATTGTTTTCAGCTGTGGAACTGGAGCCAATATTGTTGGATTTTACATCTAATATTGTCATGAGGATGGTTGGGGGAAAAAGGTATTTCGGAGATGATGTGTTGGATGAAGGACAAGCTGAGAAATTTAGAGATGTTGTGAAGAGAGTGATGTTGTATGCTGGGGCAACTAATCCAGGAGATTTTATACCATTATGGAATTGGATTGATCCAACTGGTCTGGAGAAGAAGATCATGAAAGTTGGGGAAGAAGCTGATGAAATATTTCAAGGTTTGATTGATGAGATTAGGAATGAAGAAGAAGATGGGAACACTATGATTCATCATTTACTTCACTTGCAGAATACTCAACCAGAATACTTCAGTGACCAAATCATCAAAGGCCTCATACATGTTATATTTTTAGCAGGAATTGATACAATATCTGTGACATTAGAATGGGGACTCTCGCACTTGCTCAACAATCCAAAGGTAATAAAGAAAGCGAGACTTGAGATAGAACATATTGTTGGACAAGAACGTCTAGTCAACGAAGATGATTTATCAAGTTTGAGTTATTTGCAAGGAATAATCTTAGAAACTTTGCGACTAACCCCAGCAGCCCCTCTACTTGTGCCTCACTGTGCATCCGAAGATTGCCAAATCGAAGGGTATGACATACCACGGGGCACGATCATATTTGTTAACGCTTGGGCAATACATAGAGATTCAAGTCTATGGGAAGATGTCACTAGTTTTAAGCCAGAAAGGCATGAAAATGCAATAGAATTGTCTGATTCATACAAACTATTACCATTTGGGTTGGGGAGGAGGGCATGCCCTGGTGTAGGAATGGCTCAACGTGTGCTTGGCTTGACATTGGCATCATTAATTCAATGCTTTGATTGGGAAAGAATGGATAGCTCATTAGTTGACATGACTGAAGGCCAAGGAATCACTATGCCAAAAGCTCAACCCTTGGTAGCCAAGTGTAAACCACGCCCTATTATGAGAGCTCATCTTTCATAG 1509 41.09 MDNNILVYIFFFLISLLLGLKLLLHHGKNLPPTPLFSLPLIGHLHLLKHPIHQTLHSLSKKYGHVFSLRFGSHLVVVISSPSAVRECFTKNDIILANRPFLNTGKHLSYNFTVLAVAPYGELWRRLRRISTCEIFSTSKLNSFSCIRQDEVKRLLHKLCNRNSVEELLLFSAVELEPILLDFTSNIVMRMVGGKRYFGDDVLDEGQAEKFRDVVKRVMLYAGATNPGDFIPLWNWIDPTGLEKKIMKVGEEADEIFQGLIDEIRNEEEDGNTMIHHLLHLQNTQPEYFSDQIIKGLIHVIFLAGIDTISVTLEWGLSHLLNNPKVIKKARLEIEHIVGQERLVNEDDLSSLSYLQGIILETLRLTPAAPLLVPHCASEDCQIEGYDIPRGTIIFVNAWAIHRDSSLWEDVTSFKPERHENAIELSDSYKLLPFGLGRRACPGVGMAQRVLGLTLASLIQCFDWERMDSSLVDMTEGQGITMPKAQPLVAKCKPRPIMRAHLS* 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23708458 23711044 + CsaV3_2G035440.1 Csa02g02725 520782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02725 502 Pfam Cytochrome P450 31 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 SUPERFAMILY Cytochrome P450 31 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 Gene3D Cytochrome P450 24 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Csa02g02725 502 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 499 - -
Csa02g02725 502 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 8 499 - -
Csa02g02725 502 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02725 502 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02725 Csa-Chr2:23708458 Csa06g02977 Csa-Chr6:25728642 0 dispersed
Csa02g02725 Csa-Chr2:23708458 Csa02g02727 Csa-Chr2:23724960 8.23E-169 proximal
Csa02g02725 Csa-Chr2:23708458 Csa02g02726 Csa-Chr2:23716685 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02725 K13260 - csv:105434396 979.933